RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 APBB2Q92870 758 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 SYAP1Q96A49 352 aaPredicted RBP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 HVCN1Q96D96 273 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 CPB2Q96IY4 423 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 ZFRQ96KR1 1074 aaKnown RBP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 ACO2Q99798 780 aaKnown RBP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 TARS2Q9BW92 718 aaKnown RBP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 FTHL17Q9BXU8 183 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 MRPL4Q9BYD3 311 aaKnown RBP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 AGPAT5Q9NUQ2 364 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 MAPK8IP1Q9UQF2 711 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 GDAQ9Y2T3 454 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 H0YGN5 161 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 MGEA5O60502 916 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 PIGRP01833 764 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 FGBP02675 491 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 EDN1P05305 212 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 ZSCAN20P17040 1043 aaPredicted RBP8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 PRCPP42785 496 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 MAGEA10P43363 369 aaPredicted RBP8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 EPHB4P54760 987 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 FAM189BP81408 668 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 IKBKEQ14164 716 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 KNOP1Q1ED39 458 aaKnown RBP8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 BMT2Q1RMZ1 405 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 COBLL1Q53SF7 1204 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 ATF7IP2Q5U623 682 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 NOTUMQ6P988 496 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 CNKSR3Q6P9H4 555 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 ZPBP2Q6X784 338 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 ZNF365Q70YC5 407 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 MAP4K3Q8IVH8 894 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 NELFCDQ8IXH7 590 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 SMYD4Q8IYR2 804 aaPredicted RBP8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 MYOCDQ8IZQ8 938 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 SYCP3Q8IZU3 236 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 ADSSL1Q8N142 457 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 GUF1Q8N442 669 aaKnown RBP8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 ADAM2Q99965 735 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 IKZF4Q9H2S9 585 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 TMEM206Q9H813 350 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 PTPRHQ9HD43 1115 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 RGS18Q9NS28 235 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 EXOC7Q9UPT5 735 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 PIN4Q9Y237 131 aaKnown RBP8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 TNFSF13BQ9Y275 285 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 ALPK3Q96L96 1907 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 UBE4BO95155 1302 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 CNTNAP2Q9UHC6 1331 aa8.27□□□□□ -1.09
AC004540.1-206ENST00000448056 ABHD14A-ACY1A0A1B0GW23 586 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 ANKRD63C9JTQ0 380 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 HNRNPDLO14979 420 aaKnown RBP8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 N4BP3O15049 544 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 TGFB1I1O43294 461 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 TOM1L1O75674 476 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 KIF20AO95235 890 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 ACTN1P12814 892 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 PROZP22891 400 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 ADSSP30520 456 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 SSTR3P32745 418 aaPredicted RBP8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 LIG4P49917 911 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 NLRP12P59046 1061 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 SNRPFP62306 86 aaKnown RBP8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 TMEM132AQ24JP5 1023 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 TMEM240Q5SV17 173 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 UBXN11Q5T124 520 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 EEF1DP3Q658K8 133 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 TWF2Q6IBS0 349 aaKnown RBP8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 SLFN12LQ6IEE8 588 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 SLC39A4Q6P5W5 647 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 SLC27A1Q6PCB7 646 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 SASS6Q6UVJ0 657 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 SLC24A5Q71RS6 500 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 OTOP2Q7RTS6 562 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 CDR2LQ86X02 465 aaPredicted RBP8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 MLKLQ8NB16 471 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 CCDC51Q96ER9 411 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 BICD1Q96G01 975 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 DHTKD1Q96HY7 919 aaPredicted RBP8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 ZBTB45Q96K62 511 aaPredicted RBP8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 TCHPQ9BT92 498 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 TRAIPQ9BWF2 469 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 GBP3Q9H0R5 595 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 KCTD10Q9H3F6 313 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 PDZD7Q9H5P4 517 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 STYXL1Q9Y6J8 313 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 PDE4DIPQ5VU43 2346 aa8.26□□□□□ -1.09
AC004540.1-206ENST00000448056 A0A0B4J269 797 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 A0A0U1RQF3 1178 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 TISP43B9A030 160 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 C9IYK1 514 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 PDXKO00764 312 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 ABLIM1O14639 778 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 CLDN3O15551 220 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 EFCAB14O75071 495 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 ZNF623O75123 536 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 BAIAP3O94812 1187 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 MCF2P10911 925 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms