RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 FAM43BQ6ZT52 329 aaPredicted RBP4.45□□□□□ -1.7
PMS1-216ENST00000447734 WAPLQ7Z5K2 1190 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 LRRTM4Q86VH4 590 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 SESTD1Q86VW0 696 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 HEATR4Q86WZ0 1026 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 LYSMD2Q8IV50 215 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 ATP11CQ8NB49 1132 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 FANCBQ8NB91 859 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 C3orf20Q8ND61 904 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 OR10H5Q8NGA6 315 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 PLEKHO2Q8TD55 490 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 ASB15Q8WXK1 588 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 ASB12Q8WXK4 309 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 C18orf8Q96DM3 657 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 FAM167AQ96KS9 214 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 FCRL2Q96LA5 508 aaPredicted RBP4.45□□□□□ -1.7
PMS1-216ENST00000447734 HEXIM2Q96MH2 286 aaKnown RBP4.45□□□□□ -1.7
PMS1-216ENST00000447734 CNPPD1Q9BV87 410 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 GREM2Q9H772 168 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 BRD9Q9H8M2 597 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 AKTIPQ9H8T0 292 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 SMYD2Q9NRG4 433 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 CNNM1Q9NRU3 951 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 IRAK4Q9NWZ3 460 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.45□□□□□ -1.7
PMS1-216ENST00000447734 CPA4Q9UI42 421 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 USP18Q9UMW8 372 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 RWDD3Q9Y3V2 267 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 TELO2Q9Y4R8 837 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 ASB1Q9Y576 335 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 MYPNQ86TC9 1320 aa4.45□□□□□ -1.7
PMS1-216ENST00000447734 TMEM82A0PJX8 343 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 FAM171A2A8MVW0 826 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 WASH4PA8MWX3 477 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 GOLGA6L22H0YM25 854 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 MYO1FO00160 1098 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 TRIM38O00635 465 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 DDX58O95786 925 aaKnown RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 TBX18O95935 607 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 CKMT1AP12532 417 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 BMP3P12645 472 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 SPINK2P20155 84 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 FGFR2P21802 821 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 RPS6KB1P23443 525 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 SERPINF1P36955 418 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 LIFRP42702 1097 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 NAP1L1P55209 391 aaKnown RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 SUMO3P55854 103 aaPredicted RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 SLC6A3Q01959 620 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 ROM1Q03395 351 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 MGAT2Q10469 447 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 PLS1Q14651 629 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 TIGD6Q17RP2 521 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 EMC4Q5J8M3 183 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 CCDC30Q5VVM6 783 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 SLFN12LQ6IEE8 588 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 BTNL9Q6UXG8 535 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 BRINP3Q76B58 766 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 BEND5Q7L4P6 421 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 KANSL1Q7Z3B3 1105 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 ANKRD23Q86SG2 305 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 SH2D3CQ8N5H7 860 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 GLB1L3Q8NCI6 653 aaPredicted RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 TMEM52Q8NDY8 209 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 FOXRED1Q96CU9 486 aaPredicted RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 SUCLG2Q96I99 432 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 FAM46AQ96IP4 442 aaKnown RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 MSLNLQ96KJ4 702 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 TTC14Q96N46 770 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 UBL7Q96S82 380 aaPredicted RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 C7orf25Q9BPX7 421 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 HEPHQ9BQS7 1158 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 BRIP1Q9BX63 1249 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 ALDH8A1Q9H2A2 487 aaPredicted RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 PRKRIP1Q9H875 184 aaPredicted RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 SERHLQ9NQF3 203 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 GJB4Q9NTQ9 266 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 ZSWIM5Q9P217 1185 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 ARHGAP28Q9P2N2 729 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 MYO1AQ9UBC5 1043 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 MYOTQ9UBF9 498 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 CPNE7Q9UBL6 633 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 ZC3H7BQ9UGR2 993 aaKnown RBP4.44□□□□□ -1.7
PMS1-216ENST00000447734 SYNPO2Q9UMS6 1093 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 PCDHB1Q9Y5F3 818 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 PCDHA3Q9Y5H8 950 aa4.44□□□□□ -1.7
PMS1-216ENST00000447734 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.43□□□□□ -1.7
PMS1-216ENST00000447734 PRAMEF22A3QJZ6 481 aa4.43□□□□□ -1.7
PMS1-216ENST00000447734 TISP43B9A030 160 aa4.43□□□□□ -1.7
PMS1-216ENST00000447734 B9A039 149 aa4.43□□□□□ -1.7
PMS1-216ENST00000447734 H3BS24 57 aa4.43□□□□□ -1.7
PMS1-216ENST00000447734 IPO5O00410 1097 aaKnown RBP4.43□□□□□ -1.7
PMS1-216ENST00000447734 HGSO14964 777 aaPredicted RBP4.43□□□□□ -1.7
PMS1-216ENST00000447734 HNRNPDLO14979 420 aaKnown RBP4.43□□□□□ -1.7
PMS1-216ENST00000447734 PPP1R11O60927 126 aaPredicted RBP4.43□□□□□ -1.7
PMS1-216ENST00000447734 SOAT2O75908 522 aa4.43□□□□□ -1.7
PMS1-216ENST00000447734 ARIH2O95376 493 aa4.43□□□□□ -1.7
PMS1-216ENST00000447734 CELA3BP08861 270 aa4.43□□□□□ -1.7
PMS1-216ENST00000447734 ATP1A3P13637 1013 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms