RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SLX4Q8IY92 1834 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 TCRBV7S2A1N4TA0A589 114 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 ANKRD63C9JTQ0 380 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 GCLMP48507 274 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 ELF3P78545 371 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-204ENST00000447182 MSL1Q68DK7 614 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 PADI6Q6TGC4 694 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 SPICE1Q8N0Z3 855 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 GPATCH11Q8N954 259 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 ZNF564Q8TBZ8 553 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-204ENST00000447182 RIT2Q99578 217 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 DBNDD1Q9H9R9 158 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 UVRAGQ9P2Y5 699 aa20.49■□□□□ 0.87
SDCBP-204ENST00000447182 COL2A1P02458 1487 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-204ENST00000447182 AFF2P51816 1311 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 ENTPD3O75355 529 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 SNRPFP62306 86 aaKnown RBP20.48■□□□□ 0.87
SDCBP-204ENST00000447182 RRP1BQ14684 758 aaKnown RBP20.48■□□□□ 0.87
SDCBP-204ENST00000447182 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 DACT2Q5SW24 774 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 MIGA2Q7L4E1 593 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 TRPM8Q7Z2W7 1104 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 XXYLT1Q8NBI6 393 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 ELAC2Q9BQ52 826 aaKnown RBP20.48■□□□□ 0.87
SDCBP-204ENST00000447182 PCIF1Q9H4Z3 704 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 WHRNQ9P202 907 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 GTF3C4Q9UKN8 822 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 IPO5O00410 1097 aaKnown RBP20.48■□□□□ 0.87
SDCBP-204ENST00000447182 SPOPO43791 374 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 ECEL1O95672 775 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 PDE6CP51160 858 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 RWDD2BP57060 319 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 EXOC3L1Q86VI1 746 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 CBWD1Q9BRT8 395 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 NUP85Q9BW27 656 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 MTFR1LQ9H019 292 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 RANBP17Q9H2T7 1088 aaKnown RBP20.48■□□□□ 0.87
SDCBP-204ENST00000447182 HOMER3Q9NSC5 361 aa20.48■□□□□ 0.87
SDCBP-204ENST00000447182 ZNF646O15015 1829 aaPredicted RBP20.47■□□□□ 0.87
SDCBP-204ENST00000447182 OAS1P00973 400 aaKnown RBP20.47■□□□□ 0.87
SDCBP-204ENST00000447182 VIMP08670 466 aaKnown RBP20.47■□□□□ 0.87
SDCBP-204ENST00000447182 SLCO1A2P46721 670 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 MXI1P50539 228 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 UBXN2AP68543 259 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 FMO1Q01740 532 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 CALCOCO2Q13137 446 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 RASA3Q14644 834 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 PLEKHO2Q8TD55 490 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 SHC3Q92529 594 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 KAT5Q92993 513 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 SERPINB12Q96P63 405 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 TMEM117Q9H0C3 514 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 TMX4Q9H1E5 349 aaPredicted RBP20.47■□□□□ 0.87
SDCBP-204ENST00000447182 HSPBP1Q9NZL4 362 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 MRPL11Q9Y3B7 192 aaKnown RBP20.47■□□□□ 0.87
SDCBP-204ENST00000447182 LOC102724159A0A0B4J2E5 919 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 CFAP73A6NFT4 308 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 TISP43B9A030 160 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 FSCN2O14926 492 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 TP73O15350 636 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 SNX3O60493 162 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 PDE4CQ08493 712 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 PWP2Q15269 919 aaKnown RBP20.47■□□□□ 0.87
SDCBP-204ENST00000447182 RNF207Q6ZRF8 634 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 UHMK1Q8TAS1 419 aaKnown RBP20.47■□□□□ 0.87
SDCBP-204ENST00000447182 KREMEN1Q96MU8 473 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 ST6GALNAC4Q9H4F1 302 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 CHORDC1Q9UHD1 332 aaPredicted RBP20.47■□□□□ 0.87
SDCBP-204ENST00000447182 DBR1Q9UK59 544 aaKnown RBP20.47■□□□□ 0.87
SDCBP-204ENST00000447182 PTPN22Q9Y2R2 807 aa20.47■□□□□ 0.87
SDCBP-204ENST00000447182 ZNF536O15090 1300 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 ATMINO43313 823 aaPredicted RBP20.46■□□□□ 0.87
SDCBP-204ENST00000447182 PLS3P13797 630 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 RIPK1Q13546 671 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 PPP1R7Q15435 360 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 CCDC63Q8NA47 563 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 PSPC1Q8WXF1 523 aaKnown RBP20.46■□□□□ 0.87
SDCBP-204ENST00000447182 SCLT1Q96NL6 688 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 PLVAPQ9BX97 442 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 CDC42EP4Q9H3Q1 356 aaKnown RBP20.46■□□□□ 0.87
SDCBP-204ENST00000447182 ARHGEF10LQ9HCE6 1279 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 BCS1LQ9Y276 419 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 TMX2Q9Y320 296 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 SCN9AQ15858 1988 aa20.46■□□□□ 0.87
SDCBP-204ENST00000447182 ATP6V1G2O95670 118 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 EZRP15311 586 aaKnown RBP20.45■□□□□ 0.86
SDCBP-204ENST00000447182 KCNJ1P48048 391 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 MFAP3P55082 362 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 GTF2BQ00403 316 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 HIBCHQ6NVY1 386 aaPredicted RBP20.45■□□□□ 0.86
SDCBP-204ENST00000447182 RHBDF2Q6PJF5 856 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 SLC47A2Q86VL8 602 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 GIMAP7Q8NHV1 300 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 MXRA8Q9BRK3 442 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 AAASQ9NRG9 546 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 CYP26A1O43174 497 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 P4HBP07237 508 aaKnown RBP20.45■□□□□ 0.86
SDCBP-204ENST00000447182 ECE1P42892 770 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 CCDC174Q6PII3 467 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 CEP57Q86XR8 500 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms