RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 SMAD4Q13485 552 aaKnown RBP24.38■■□□□ 1.49
HDLBP-220ENST00000442730 KCNC3Q14003 757 aa24.38■■□□□ 1.49
HDLBP-220ENST00000442730 NT5DC1Q5TFE4 455 aa24.38■■□□□ 1.49
HDLBP-220ENST00000442730 FAM178BQ8IXR5 827 aa24.38■■□□□ 1.49
HDLBP-220ENST00000442730 COLGALT2Q8IYK4 626 aa24.38■■□□□ 1.49
HDLBP-220ENST00000442730 MRPL43Q8N983 215 aaKnown RBP24.38■■□□□ 1.49
HDLBP-220ENST00000442730 C17orf75Q9HAS0 396 aa24.38■■□□□ 1.49
HDLBP-220ENST00000442730 KCND2Q9NZV8 630 aa24.38■■□□□ 1.49
HDLBP-220ENST00000442730 FAM50BQ9Y247 325 aa24.38■■□□□ 1.49
HDLBP-220ENST00000442730 COASYQ13057 564 aa24.37■■□□□ 1.49
HDLBP-220ENST00000442730 HSCBQ8IWL3 235 aa24.37■■□□□ 1.49
HDLBP-220ENST00000442730 SMRP1Q8NCR6 262 aa24.37■■□□□ 1.49
HDLBP-220ENST00000442730 CALML4Q96GE6 196 aa24.37■■□□□ 1.49
HDLBP-220ENST00000442730 MARCH5Q9NX47 278 aa24.37■■□□□ 1.49
HDLBP-220ENST00000442730 KLK14Q9P0G3 267 aa24.37■■□□□ 1.49
HDLBP-220ENST00000442730 PARP2Q9UGN5 583 aa24.37■■□□□ 1.49
HDLBP-220ENST00000442730 K7ERI5 159 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 NRP1O14786 923 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 MBTPS2O43462 519 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 PLCG1P19174 1290 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 GRIK3Q13003 919 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 KARSQ15046 597 aaKnown RBP24.36■■□□□ 1.49
HDLBP-220ENST00000442730 SMAD2Q15796 467 aaKnown RBP24.36■■□□□ 1.49
HDLBP-220ENST00000442730 DCAF4L1Q3SXM0 396 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 ATF7IP2Q5U623 682 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 TAS1R3Q7RTX0 852 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 AUTS2Q8WXX7 1259 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 ADPGKQ9BRR6 497 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 KMT5AQ9NQR1 393 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 FBXO2Q9UK22 296 aaPredicted RBP24.36■■□□□ 1.49
HDLBP-220ENST00000442730 FAN1Q9Y2M0 1017 aa24.36■■□□□ 1.49
HDLBP-220ENST00000442730 PRG3Q9Y2Y8 225 aaPredicted RBP24.36■■□□□ 1.49
HDLBP-220ENST00000442730 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.35■■□□□ 1.49
HDLBP-220ENST00000442730 SFI1A8K8P3 1242 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 RECQL4O94761 1208 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 ALDH2P05091 517 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 CTSAP10619 480 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 PLS3P13797 630 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 MARCKSP29966 332 aaPredicted RBP24.35■■□□□ 1.49
HDLBP-220ENST00000442730 ARSHQ5FYA8 562 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 TMEM184AQ6ZMB5 413 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 SPIRE2Q8WWL2 714 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 TMEM134Q9H6X4 195 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 CD320Q9NPF0 282 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 BLOC1S4Q9NUP1 217 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 SNTG2Q9NY99 539 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 RBM19Q9Y4C8 960 aaKnown RBP24.35■■□□□ 1.49
HDLBP-220ENST00000442730 IRAK3Q9Y616 596 aa24.35■■□□□ 1.49
HDLBP-220ENST00000442730 NPHP3-ACAD11A0A0J9YXS1 232 aa24.34■■□□□ 1.49
HDLBP-220ENST00000442730 SLC16A4O15374 487 aa24.34■■□□□ 1.49
HDLBP-220ENST00000442730 OR1G1P47890 313 aa24.34■■□□□ 1.49
HDLBP-220ENST00000442730 BMS1Q14692 1282 aaKnown RBP24.34■■□□□ 1.49
HDLBP-220ENST00000442730 PTPN14Q15678 1187 aa24.34■■□□□ 1.49
HDLBP-220ENST00000442730 LLGL2Q6P1M3 1020 aa24.34■■□□□ 1.49
HDLBP-220ENST00000442730 RASSF8Q8NHQ8 419 aa24.34■■□□□ 1.49
HDLBP-220ENST00000442730 RPS6KC1Q96S38 1066 aa24.34■■□□□ 1.49
HDLBP-220ENST00000442730 ZSCAN16Q9H4T2 348 aaPredicted RBP24.34■■□□□ 1.49
HDLBP-220ENST00000442730 STK39Q9UEW8 545 aa24.34■■□□□ 1.49
HDLBP-220ENST00000442730 TNFSF13BQ9Y275 285 aa24.34■■□□□ 1.49
HDLBP-220ENST00000442730 C5orf42Q9H799 3197 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 F8W810 466 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 CLASP2O75122 1294 aaKnown RBP24.33■■□□□ 1.49
HDLBP-220ENST00000442730 CXCL14O95715 111 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 SRGAP2BP0DMP2 458 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 CA8P35219 290 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 CACNB1Q02641 598 aaPredicted RBP24.33■■□□□ 1.49
HDLBP-220ENST00000442730 CEBPZQ03701 1054 aaKnown RBP24.33■■□□□ 1.49
HDLBP-220ENST00000442730 ZP2Q05996 745 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 USP49Q70CQ1 688 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 GPBP1Q86WP2 473 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 TMEM161BQ8NDZ6 487 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 RAD54LQ92698 747 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 USP28Q96RU2 1077 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 ACO2Q99798 780 aaKnown RBP24.33■■□□□ 1.49
HDLBP-220ENST00000442730 NTPCRQ9BSD7 190 aaKnown RBP24.33■■□□□ 1.49
HDLBP-220ENST00000442730 MRPL4Q9BYD3 311 aaKnown RBP24.33■■□□□ 1.49
HDLBP-220ENST00000442730 CCSER1Q9C0I3 900 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 DAXXQ9UER7 740 aaPredicted RBP24.33■■□□□ 1.49
HDLBP-220ENST00000442730 PRKAG3Q9UGI9 489 aa24.33■■□□□ 1.49
HDLBP-220ENST00000442730 SRPRBQ9Y5M8 271 aaKnown RBP24.33■■□□□ 1.49
HDLBP-220ENST00000442730 MORC2Q9Y6X9 1032 aaPredicted RBP24.33■■□□□ 1.49
HDLBP-220ENST00000442730 TDRD15B5MCY1 1934 aaKnown RBP24.33■■□□□ 1.49
HDLBP-220ENST00000442730 PTGESO14684 152 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 EFEMP2O95967 443 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 GIT2Q14161 759 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 SPECC1Q5M775 1068 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 ADHFE1Q8IWW8 467 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 EPSTI1Q96J88 318 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 REEP2Q9BRK0 252 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 CXCL16Q9H2A7 254 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 PTPRHQ9HD43 1115 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 ODF2LQ9ULJ1 636 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 HCFC2Q9Y5Z7 792 aa24.32■■□□□ 1.48
HDLBP-220ENST00000442730 NR1I2O75469 434 aa24.31■■□□□ 1.48
HDLBP-220ENST00000442730 MAPTP10636 758 aaKnown RBP24.31■■□□□ 1.48
HDLBP-220ENST00000442730 MCM6Q14566 821 aa24.31■■□□□ 1.48
HDLBP-220ENST00000442730 ZNF568Q3ZCX4 644 aa24.31■■□□□ 1.48
HDLBP-220ENST00000442730 ANKRD54Q6NXT1 300 aa24.31■■□□□ 1.48
HDLBP-220ENST00000442730 APBB1IPQ7Z5R6 666 aaPredicted RBP24.31■■□□□ 1.48
HDLBP-220ENST00000442730 RNF168Q8IYW5 571 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms