RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 CYP26A1O43174 497 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 ATMINO43313 823 aaPredicted RBP17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 CHN1P15882 459 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 CHRNB2P17787 502 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 MMP13P45452 471 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 HSD17B4P51659 736 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 MFAP3P55082 362 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 SLMAPQ14BN4 828 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 ZSWIM2Q8NEG5 633 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 PLEKHO2Q8TD55 490 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 CD101Q93033 1021 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 SELENOSQ9BQE4 189 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 NUP85Q9BW27 656 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 FAM129AQ9BZQ8 928 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 DEFB129Q9H1M3 183 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 CCPG1Q9ULG6 757 aa17.73■□□□□ 0.43
SEMA3B-207ENST00000441915 SPDYE2BA6NHP3 402 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 SMIM23A6NLE4 172 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 SPDYE6P0CI01 402 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 MSL1Q68DK7 614 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 SLC47A2Q86VL8 602 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 SLC13A5Q86YT5 568 aaPredicted RBP17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 ST6GALNAC4Q9H4F1 302 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 DONSONQ9NYP3 566 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 DHX15O43143 795 aaKnown RBP17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 MMEP08473 750 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 DRD4P21917 467 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 YWHABP31946 246 aaKnown RBP17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 MAP2K1Q02750 393 aaPredicted RBP17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 CYP1B1Q16678 543 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 FLAD1Q8NFF5 587 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 AGBL1Q96MI9 1066 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 SH2D3AQ9BRG2 576 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 USP20Q9Y2K6 914 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 PTPN22Q9Y2R2 807 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 PCDHA3Q9Y5H8 950 aa17.72■□□□□ 0.43
SEMA3B-207ENST00000441915 AGTP01019 485 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 COILP38432 576 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 PEX3P56589 373 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 NIPA1Q7RTP0 329 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 P3H4Q92791 437 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 ZNF653Q96CK0 615 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 KREMEN1Q96MU8 473 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 AZI2Q9H6S1 392 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 QTRT2Q9H974 415 aaKnown RBP17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 ACP6Q9NPH0 428 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 GTF3C4Q9UKN8 822 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 PASKQ96RG2 1323 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 GOLGA8IPA6NC78 632 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 GOLGA8JA6NMD2 632 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 SLC16A4O15374 487 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 ICAM1P05362 532 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 RARGP13631 454 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 RWDD2BP57060 319 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 FMO1Q01740 532 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 ANKRD20A8PQ5CZ79 823 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 CYFIP1Q7L576 1253 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 SHC3Q92529 594 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 STMN4Q9H169 189 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 UVRAGQ9P2Y5 699 aa17.71■□□□□ 0.43
SEMA3B-207ENST00000441915 YDJCA8MPS7 323 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 PPIP5K2O43314 1243 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 ALAS1P13196 640 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 FGFR4P22455 802 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 PDE6CP51160 858 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 SNRNP35Q16560 246 aaKnown RBP17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 KRT39Q6A163 491 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 SLC17A8Q8NDX2 589 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 BTBD6Q96KE9 485 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 TIPINQ9BVW5 301 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 PLVAPQ9BX97 442 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 AGO4Q9HCK5 861 aaKnown RBP17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 KLC4Q9NSK0 619 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 COL20A1Q9P218 1284 aa17.71■□□□□ 0.42
SEMA3B-207ENST00000441915 TCRBV7S2A1N4TA0A589 114 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 RIPK2O43353 540 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 RASSF9O75901 435 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 LYPLA2O95372 231 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 CYP1A2P05177 515 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 CYP11B1P15538 503 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 MTMR1Q13613 665 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 TKFCQ3LXA3 575 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 TRMT1LQ7Z2T5 733 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 CNKSR1Q969H4 720 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 CCDC127Q96BQ5 260 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 TMEM109Q9BVC6 243 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 ZNF70Q9UC06 446 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 EXOC7Q9UPT5 735 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 DNM1LO00429 736 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 ADRB2P07550 413 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 RARAP10276 462 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 MAP2K2P36507 400 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 CAP2P40123 477 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 IFI35P80217 286 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 CALCOCO2Q13137 446 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 DLGAP5Q15398 846 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 CBWD2Q8IUF1 395 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms