RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 SLC11A1P49279 550 aa12.71□□□□□ -0.37
IRF1-204ENST00000439555 GNL2Q13823 731 aaKnown RBP12.71□□□□□ -0.37
IRF1-204ENST00000439555 PUM1Q14671 1186 aaKnown RBP eCLIP12.71□□□□□ -0.37
IRF1-204ENST00000439555 FAM187BQ17R55 369 aa12.71□□□□□ -0.37
IRF1-204ENST00000439555 LONRF3Q496Y0 759 aa12.71□□□□□ -0.37
IRF1-204ENST00000439555 CDCA2Q69YH5 1023 aaPredicted RBP12.71□□□□□ -0.37
IRF1-204ENST00000439555 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
IRF1-204ENST00000439555 PPFIBP1Q86W92 1011 aa12.71□□□□□ -0.37
IRF1-204ENST00000439555 CCDC105Q8IYK2 499 aa12.71□□□□□ -0.37
IRF1-204ENST00000439555 FAM193BQ96PV7 902 aaPredicted RBP12.71□□□□□ -0.37
IRF1-204ENST00000439555 POLR3FQ9H1D9 316 aaPredicted RBP12.71□□□□□ -0.37
IRF1-204ENST00000439555 MFSD1Q9H3U5 465 aa12.71□□□□□ -0.37
IRF1-204ENST00000439555 POMKQ9H5K3 350 aa12.71□□□□□ -0.37
IRF1-204ENST00000439555 PRMT7Q9NVM4 692 aaPredicted RBP12.71□□□□□ -0.37
IRF1-204ENST00000439555 DNAJB4Q9UDY4 337 aa12.71□□□□□ -0.37
IRF1-204ENST00000439555 FAN1Q9Y2M0 1017 aa12.71□□□□□ -0.37
IRF1-204ENST00000439555 FRYLO94915 3013 aa12.71□□□□□ -0.38
IRF1-204ENST00000439555 KMT2BQ9UMN6 2715 aaPredicted RBP12.7□□□□□ -0.38
IRF1-204ENST00000439555 ARL5CA6NH57 179 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 LAD1O00515 517 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 USO1O60763 962 aaKnown RBP12.7□□□□□ -0.38
IRF1-204ENST00000439555 AFF1P51825 1210 aaKnown RBP12.7□□□□□ -0.38
IRF1-204ENST00000439555 DSC1Q08554 894 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 SLC27A1Q6PCB7 646 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 DGLUCYQ7Z3D6 616 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 GPR65Q8IYL9 337 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 TMEM87AQ8NBN3 555 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 BCL7CQ8WUZ0 217 aaPredicted RBP12.7□□□□□ -0.38
IRF1-204ENST00000439555 EIF2AQ9BY44 585 aaKnown RBP12.7□□□□□ -0.38
IRF1-204ENST00000439555 RAB34Q9BZG1 259 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 TRIM6Q9C030 488 aaPredicted RBP12.7□□□□□ -0.38
IRF1-204ENST00000439555 C2orf40Q9H1Z8 148 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 FZD8Q9H461 694 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 DZANK1Q9NVP4 752 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 SSX2IPQ9Y2D8 614 aa12.7□□□□□ -0.38
IRF1-204ENST00000439555 C2orf16Q68DN1 1984 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.69□□□□□ -0.38
IRF1-204ENST00000439555 MED19A0JLT2 244 aaPredicted RBP12.69□□□□□ -0.38
IRF1-204ENST00000439555 ARHGEF35A5YM69 484 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 NRP1O14786 923 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 B4GALT3O60512 393 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 LILRB3O75022 631 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 NR1I2O75469 434 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 EFEMP2O95967 443 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 C1RP00736 705 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 POMCP01189 267 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 LMNAP02545 664 aaKnown RBP12.69□□□□□ -0.38
IRF1-204ENST00000439555 PRPHP41219 470 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 NAMPTP43490 491 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 MCM2P49736 904 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 TOB1P50616 345 aaPredicted RBP12.69□□□□□ -0.38
IRF1-204ENST00000439555 PPP2R5AQ15172 486 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 ANGPT1Q15389 498 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 PTPN14Q15678 1187 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 ATAT1Q5SQI0 421 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 CWF19L1Q69YN2 538 aaKnown RBP12.69□□□□□ -0.38
IRF1-204ENST00000439555 LLGL2Q6P1M3 1020 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 POTEGQ6S5H5 508 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 PADI6Q6TGC4 694 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 ZBTB8OSQ8IWT0 167 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 COLGALT2Q8IYK4 626 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 IGSF22Q8N9C0 903 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 SLC22A17Q8WUG5 538 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 RMDN1Q96DB5 314 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 BORCS6Q96GS4 357 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 CPB2Q96IY4 423 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 GAD1Q99259 594 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 EMILIN2Q9BXX0 1053 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 GBP3Q9H0R5 595 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 GPRC5CQ9NQ84 441 aa12.69□□□□□ -0.38
IRF1-204ENST00000439555 EP300Q09472 2414 aaPredicted RBP12.69□□□□□ -0.38
IRF1-204ENST00000439555 A0A087WWV3 80 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 LRRIQ4A6NIV6 560 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 NPR3P17342 541 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 EFNA5P52803 228 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 PTGDRQ13258 359 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 MAPK6Q16659 721 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 KIAA1841Q6NSI8 718 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 RNF168Q8IYW5 571 aaPredicted RBP12.68□□□□□ -0.38
IRF1-204ENST00000439555 KCTD17Q8N5Z5 321 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 DTWD2Q8NBA8 298 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 GSTCDQ8NEC7 633 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 KIFAP3Q92845 792 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 VN1R3Q9BXE9 311 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
IRF1-204ENST00000439555 TSHZ2Q9NRE2 1034 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 MRPL17Q9NRX2 175 aaKnown RBP12.68□□□□□ -0.38
IRF1-204ENST00000439555 DLL3Q9NYJ7 618 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 LRWD1Q9UFC0 647 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 LIMD1Q9UGP4 676 aa12.68□□□□□ -0.38
IRF1-204ENST00000439555 MTCL1Q9Y4B5 1905 aaKnown RBP12.68□□□□□ -0.38
IRF1-204ENST00000439555 ACKR2O00590 384 aa12.67□□□□□ -0.38
IRF1-204ENST00000439555 N4BP3O15049 544 aa12.67□□□□□ -0.38
IRF1-204ENST00000439555 B4GALT5O43286 388 aa12.67□□□□□ -0.38
IRF1-204ENST00000439555 SOD2P04179 222 aa12.67□□□□□ -0.38
IRF1-204ENST00000439555 SP100P23497 879 aaPredicted RBP12.67□□□□□ -0.38
IRF1-204ENST00000439555 CCT6AP40227 531 aaKnown RBP12.67□□□□□ -0.38
IRF1-204ENST00000439555 MLH1P40692 756 aa12.67□□□□□ -0.38
IRF1-204ENST00000439555 RILPL1Q5EBL4 403 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms