RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 PLIN2Q99541 437 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 KIFC3Q9BVG8 833 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 NFKBIZQ9BYH8 718 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 CCDC113Q9H0I3 377 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 LMAN2LQ9H0V9 348 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 NSUN3Q9H649 340 aaKnown RBP9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 TBC1D13Q9NVG8 400 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 MTMR6Q9Y217 621 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 HES2Q9Y543 173 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 PCDHB2Q9Y5E7 798 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 ANK1P16157 1881 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 MUC3AQ02505 3323 aa9.46□□□□□ -0.9
HERPUD2-206ENST00000438224 MTCL1Q9Y4B5 1905 aaKnown RBP9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 C2orf16Q68DN1 1984 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 PPP1R3GB7ZBB8 358 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 NT5C1B-RDH14C9J2C7 533 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 TBX10O75333 385 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 OFD1O75665 1012 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 ERLIN2O94905 339 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 EYA4O95677 639 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 ZNF16P17020 682 aaPredicted RBP9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 LAG3P18627 525 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 RAB27AP51159 221 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 ERVFC1P60507 584 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 RBM10P98175 930 aaKnown RBP9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 DLX2Q07687 328 aaPredicted RBP9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 TFDP1Q14186 410 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 SF3A1Q15459 793 aaKnown RBP9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 CTC1Q2NKJ3 1217 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 TMEM119Q4V9L6 283 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 NAALADL2Q58DX5 795 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 SPOUT1Q5T280 376 aaKnown RBP9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 ARL6IP4Q66PJ3 421 aaKnown RBP9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 USP49Q70CQ1 688 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 TAS1R3Q7RTX0 852 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 BRAPQ7Z569 592 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 ZNF280BQ86YH2 543 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 SLC39A11Q8N1S5 342 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 ZNF558Q96NG5 402 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 VN1R3Q9BXE9 311 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 CXCL16Q9H2A7 254 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 NXF3Q9H4D5 531 aaKnown RBP9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 NRDE2Q9H7Z3 1164 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 MIOSQ9NXC5 875 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 DNAJB4Q9UDY4 337 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 COG5Q9UP83 839 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 INPP5FQ9Y2H2 1132 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 IPPQ9Y573 584 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 CLIC4Q9Y696 253 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 TRIOO75962 3097 aa9.45□□□□□ -0.9
HERPUD2-206ENST00000438224 H3BQ06 376 aaPredicted RBP9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 FSCN2O14926 492 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 HIP1RO75146 1068 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 DDHD2O94830 711 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 NPTXRO95502 500 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 GLP2RO95838 553 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 NCLP19338 710 aaKnown RBP9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 KCNA5P22460 613 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 SLC11A1P49279 550 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 NR6A1Q15406 480 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 ZRSR1Q15695 479 aaKnown RBP9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 FAM187BQ17R55 369 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 NOMO2Q5JPE7 1267 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 KRT79Q5XKE5 535 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 EEF1DP3Q658K8 133 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 RINT1Q6NUQ1 792 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 NOTUMQ6P988 496 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 C1orf186Q6ZWK4 172 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 THNSL1Q8IYQ7 743 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 ABI1Q8IZP0 508 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 VN1R2Q8NFZ6 395 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 ZFP42Q96MM3 310 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 RAB34Q9BZG1 259 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 CSRNP2Q9H175 543 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 FZD8Q9H461 694 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 RSAD1Q9HA92 442 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 PCDHB12Q9Y5F1 795 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 CNTNAP2Q9UHC6 1331 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 MYO10Q9HD67 2058 aa9.44□□□□□ -0.9
HERPUD2-206ENST00000438224 NPHP3-ACAD11A0A0J9YXS1 232 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 A0A1B0GUA9 196 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 SOWAHDA6NJG2 315 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 SFI1A8K8P3 1242 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 HIDE1A8MVS5 230 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 F8W810 466 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 INPPL1O15357 1258 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 ZC3H11AO75152 810 aaKnown RBP eCLIP9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 PRKCBP05771 671 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 GALTP07902 379 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 PDCP20941 246 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 MARCKSP29966 332 aaPredicted RBP9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 AXLP30530 894 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 NAMPTP43490 491 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 NRIP1P48552 1158 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 SLC12A3P55017 1021 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 BCAR1P56945 870 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 PLCB3Q01970 1234 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 UBE3AQ05086 875 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 RAD51AP2Q09MP3 1159 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms