RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 CSRNP1Q96S65 589 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 PRMT1Q99873 361 aaKnown RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 LUC7LQ9NQ29 371 aaKnown RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 CTTNBP2NLQ9P2B4 639 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 PI4KBQ9UBF8 816 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 TPX2Q9ULW0 747 aaKnown RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 TRIM33Q9UPN9 1127 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 R3HDM2Q9Y2K5 976 aaKnown RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 CD2APQ9Y5K6 639 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 PFASO15067 1338 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 CCDC188H7C350 402 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 K7ENM7 598 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 CLDN3O15551 220 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 GAS7O60861 476 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 PIAS1O75925 651 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ITGBL1O95965 494 aaPredicted RBP7.73□□□□□ -1.17
COL28A1-202ENST00000430711 PAEPP09466 180 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 TNFAIP3P21580 790 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ADSSP30520 456 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 VPS41P49754 854 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 PMS2P54278 862 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 NPEPPSP55786 919 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 FMO1Q01740 532 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 PDE4CQ08493 712 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 E2F5Q15329 346 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ACCSLQ4AC99 568 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ERMARDQ5T6L9 678 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 CYP4X1Q8N118 509 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ANKLE1Q8NAG6 615 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 GMCL1P1Q8NEA9 526 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ERMNQ8TAM6 284 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 EPS8L1Q8TE68 723 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 SPIRE2Q8WWL2 714 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 CD101Q93033 1021 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 GMCL1Q96IK5 515 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 FAM20AQ96MK3 541 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ZSWIM1Q9BR11 485 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 FAM129AQ9BZQ8 928 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 TMEM117Q9H0C3 514 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 SLITRK6Q9H5Y7 841 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 CHST7Q9NS84 486 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 DAAM1Q9Y4D1 1078 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 TBX3O15119 743 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 SLC16A4O15374 487 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ATP9AO75110 1047 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 KIAA0754O94854 1291 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ACSL3O95573 720 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 MMP10P09238 476 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 TCF4P15884 667 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 CDC25CP30307 473 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ADCY2Q08462 1091 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 PPP2R5CQ13362 524 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 C10orf76Q5T2E6 689 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 AGBL2Q5U5Z8 902 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 CYB5D1Q6P9G0 228 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 TMEM179Q6ZVK1 233 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 B4GALNT4Q76KP1 1039 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 C1orf131Q8NDD1 294 aaKnown RBP7.73□□□□□ -1.17
COL28A1-202ENST00000430711 BSNDQ8WZ55 320 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 POMGNT1Q8WZA1 660 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 CCDC127Q96BQ5 260 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 LRRC45Q96CN5 670 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 WNK4Q96J92 1243 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 ZNF577Q9BSK1 485 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 IDI2Q9BXS1 227 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 HOMER2Q9NSB8 354 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 KLC4Q9NSK0 619 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 PNMA3Q9UL41 463 aa7.73□□□□□ -1.17
COL28A1-202ENST00000430711 UTP11Q9Y3A2 253 aaKnown RBP7.73□□□□□ -1.17
COL28A1-202ENST00000430711 BZW2Q9Y6E2 419 aaKnown RBP7.73□□□□□ -1.17
COL28A1-202ENST00000430711 GTPBP10A4D1E9 387 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 GOLGA6L10A6NI86 522 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 DHX15O43143 795 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 ALAS1P13196 640 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 RPL13P26373 211 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 IFFO1Q0D2I5 559 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 AUHQ13825 339 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 FAM133BQ5BKY9 247 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 CGB2Q6NT52 195 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 SLC39A4Q6P5W5 647 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 CCDC137Q6PK04 289 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 PADI6Q6TGC4 694 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 GLIS1Q8NBF1 620 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 PRCCQ92733 491 aaPredicted RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 HVCN1Q96D96 273 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 THOC1Q96FV9 657 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 CABS1Q96KC9 395 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 CCDC17Q96LX7 622 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 ELAC2Q9BQ52 826 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 CARD9Q9H257 536 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 PABPC3Q9H361 631 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 METTL14Q9HCE5 456 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 KLHL11Q9NVR0 708 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 TTC7AQ9ULT0 858 aaPredicted RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 ADGRA3Q8IWK6 1321 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 ATXN2Q99700 1313 aaKnown RBP7.72□□□□□ -1.17
COL28A1-202ENST00000430711 FER1L6Q2WGJ9 1857 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 ANKRD62A6NC57 917 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 G3V3G9 751 aa7.72□□□□□ -1.17
COL28A1-202ENST00000430711 IPO5O00410 1097 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms