RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ATP8B4Q8TF62 1192 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 DCAF15Q66K64 600 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 TOGARAM2Q6ZUX3 1019 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 GPT2Q8TD30 523 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 BFARQ9NZS9 450 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 CAND2O75155 1236 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 PHKA1P46020 1223 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 PPP3CCP48454 512 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 ERFP50548 548 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 RASGRF1Q13972 1273 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 GPKOWQ92917 476 aaPredicted RBP eCLIP17.35■□□□□ 0.371e-6■■■□□ 16
RIF1-204ENST00000430328 WDR11Q9BZH6 1224 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 DYRK4Q9NR20 520 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 COBLL1Q53SF7 1204 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 TRIM62Q9BVG3 475 aa17.35■□□□□ 0.37
RIF1-204ENST00000430328 LRRC63Q05C16 580 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 PDIA2Q13087 525 aaKnown RBP17.34■□□□□ 0.37
RIF1-204ENST00000430328 NFIL3Q16649 462 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 ADAM22Q9P0K1 906 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 SCAF11Q99590 1463 aaKnown RBP17.34■□□□□ 0.37
RIF1-204ENST00000430328 A0A1W2PQ27 194 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 A0A1W2PQ64 194 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 A0A1W2PQD8 194 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 H0YIN7 160 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 ROR1Q01973 937 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 CUL4AQ13619 759 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 C1DQ13901 141 aaKnown RBP17.34■□□□□ 0.37
RIF1-204ENST00000430328 TAB1Q15750 504 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 BNIPLQ7Z465 357 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 TBKBP1A7MCY6 615 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 ALDH6A1Q02252 535 aaKnown RBP17.34■□□□□ 0.37
RIF1-204ENST00000430328 TRIM32Q13049 653 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 CDYLQ9Y232 598 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 PCDHA1Q9Y5I3 950 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 VSNL1P62760 191 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 LRRC47Q8N1G4 583 aaKnown RBP17.34■□□□□ 0.37
RIF1-204ENST00000430328 AVENQ9NQS1 362 aaPredicted RBP17.34■□□□□ 0.37
RIF1-204ENST00000430328 SH3TC1Q8TE82 1336 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 ZNF786Q8N393 782 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 CEP170P1Q96L14 293 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 MLPHQ9BV36 600 aaPredicted RBP17.34■□□□□ 0.37
RIF1-204ENST00000430328 RERGLQ9H628 205 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 LGALS3BPQ08380 585 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 FBXW10Q5XX13 1052 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 DPP9Q86TI2 863 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 ZNF713Q8N859 430 aaPredicted RBP17.34■□□□□ 0.37
RIF1-204ENST00000430328 WDR36Q8NI36 951 aaKnown RBP17.34■□□□□ 0.37
RIF1-204ENST00000430328 CEP44Q9C0F1 390 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 CCDC87Q9NVE4 849 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 IFNEQ86WN2 208 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 NIM1KQ8IY84 436 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 MB21D1Q8N884 522 aa17.34■□□□□ 0.37
RIF1-204ENST00000430328 BTBD18B2RXH4 712 aa17.33■□□□□ 0.37
RIF1-204ENST00000430328 PSMC3P17980 439 aa17.33■□□□□ 0.37
RIF1-204ENST00000430328 ZNF618Q5T7W0 954 aa17.33■□□□□ 0.37
RIF1-204ENST00000430328 LRRC8DQ7L1W4 858 aa17.33■□□□□ 0.37
RIF1-204ENST00000430328 VPS37AQ8NEZ2 397 aa17.33■□□□□ 0.37
RIF1-204ENST00000430328 CDHR1Q96JP9 859 aa17.33■□□□□ 0.37
RIF1-204ENST00000430328 BCL2L14Q9BZR8 327 aa17.33■□□□□ 0.37
RIF1-204ENST00000430328 REXO4Q9GZR2 422 aaKnown RBP17.33■□□□□ 0.37
RIF1-204ENST00000430328 MAN1B1Q9UKM7 699 aa17.33■□□□□ 0.37
RIF1-204ENST00000430328 S100A6P06703 90 aa17.33■□□□□ 0.37
RIF1-204ENST00000430328 SMAPO00193 183 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 SRP72O76094 671 aaKnown RBP17.33■□□□□ 0.36
RIF1-204ENST00000430328 PCP11498 1178 aaKnown RBP17.33■□□□□ 0.36
RIF1-204ENST00000430328 GPC5P78333 572 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 ALFQ53S48 1182 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 ZBTB33Q86T24 672 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 FOXP3Q9BZS1 431 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 RANBP17Q9H2T7 1088 aaKnown RBP17.33■□□□□ 0.36
RIF1-204ENST00000430328 GTF2A1LQ9UNN4 478 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 A0A1W2PRG6 482 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 GNPATO15228 680 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 ARF5P84085 180 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 DCTN2Q13561 401 aaKnown RBP17.33■□□□□ 0.36
RIF1-204ENST00000430328 ATXN7L3BQ96GX2 97 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 TINF2Q9BSI4 451 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 MAGEA13PA6NCF6 341 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 KPNA4O00629 521 aaPredicted RBP17.33■□□□□ 0.36
RIF1-204ENST00000430328 GUCY1B2O75343 617 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 MARK3P27448 753 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 ACCSLQ4AC99 568 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 MTHFD1LQ6UB35 978 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 PLBD2Q8NHP8 589 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 ZBTB10Q96DT7 871 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 METTL22Q9BUU2 404 aaPredicted RBP17.33■□□□□ 0.36
RIF1-204ENST00000430328 GALNT8Q9NY28 637 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 POLIQ9UNA4 740 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 ABCC5O15440 1437 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 AIM2O14862 343 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 ATP6V1C1P21283 382 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 DPCR1Q3MIW9 517 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 ZNF544Q6NX49 715 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 RAD18Q9NS91 495 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 ZFATQ9P243 1243 aa17.33■□□□□ 0.36
RIF1-204ENST00000430328 SMG5Q9UPR3 1016 aaKnown RBP17.33■□□□□ 0.36
RIF1-204ENST00000430328 PFKFB2O60825 505 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 ADD3Q9UEY8 706 aaKnown RBP17.32■□□□□ 0.36
RIF1-204ENST00000430328 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms