RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 LARGE2Q8N3Y3 721 aa16.15■□□□□ 0.18
LINC00839-202ENST00000429940 BANK1Q8NDB2 785 aa16.15■□□□□ 0.18
LINC00839-202ENST00000429940 NACC1Q96RE7 527 aa16.15■□□□□ 0.18
LINC00839-202ENST00000429940 WNT8AQ9H1J5 351 aa16.15■□□□□ 0.18
LINC00839-202ENST00000429940 MTUS1Q9ULD2 1270 aa16.15■□□□□ 0.18
LINC00839-202ENST00000429940 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.15■□□□□ 0.18
LINC00839-202ENST00000429940 ANKRD63C9JTQ0 380 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 CETN1Q12798 172 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 AUHQ13825 339 aaKnown RBP16.14■□□□□ 0.17
LINC00839-202ENST00000429940 TATDN1Q6P1N9 297 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 SLC9A9Q8IVB4 645 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 CCDC63Q8NA47 563 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 ART4Q93070 314 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 WRAP73Q9P2S5 460 aaPredicted RBP16.14■□□□□ 0.17
LINC00839-202ENST00000429940 DBR1Q9UK59 544 aaKnown RBP16.14■□□□□ 0.17
LINC00839-202ENST00000429940 PASKQ96RG2 1323 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 TCRBV7S2A1N4TA0A589 114 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 GAS7O60861 476 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 RTN2O75298 545 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 ATP6V1G2O95670 118 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 ELF1P32519 619 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 COILP38432 576 aaPredicted RBP16.14■□□□□ 0.17
LINC00839-202ENST00000429940 CNGA2Q16280 664 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 ABCB5Q2M3G0 1257 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 CCDC38Q502W7 563 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 TRPM8Q7Z2W7 1104 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 CCDC25Q86WR0 208 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 SLC5A5Q92911 643 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 KCND2Q9NZV8 630 aa16.14■□□□□ 0.17
LINC00839-202ENST00000429940 RBBP6Q7Z6E9 1792 aaKnown RBP16.14■□□□□ 0.17
LINC00839-202ENST00000429940 ATMINO43313 823 aaPredicted RBP16.13■□□□□ 0.17
LINC00839-202ENST00000429940 CFBP00751 764 aa16.13■□□□□ 0.17
LINC00839-202ENST00000429940 CYP1B1Q16678 543 aa16.13■□□□□ 0.17
LINC00839-202ENST00000429940 FAM133BQ5BKY9 247 aaKnown RBP16.13■□□□□ 0.17
LINC00839-202ENST00000429940 TNFAIP8L3Q5GJ75 292 aa16.13■□□□□ 0.17
LINC00839-202ENST00000429940 CYFIP1Q7L576 1253 aa16.13■□□□□ 0.17
LINC00839-202ENST00000429940 SH3BP5LQ7L8J4 393 aa16.13■□□□□ 0.17
LINC00839-202ENST00000429940 MORC4Q8TE76 937 aa16.13■□□□□ 0.17
LINC00839-202ENST00000429940 N4BP2L2Q92802 583 aaPredicted RBP16.13■□□□□ 0.17
LINC00839-202ENST00000429940 VTI1AQ96AJ9 217 aa16.13■□□□□ 0.17
LINC00839-202ENST00000429940 ZDHHC15Q96MV8 337 aa16.13■□□□□ 0.17
LINC00839-202ENST00000429940 RUNDC3BQ96NL0 473 aa16.13■□□□□ 0.17
LINC00839-202ENST00000429940 PCIF1Q9H4Z3 704 aa16.13■□□□□ 0.17
LINC00839-202ENST00000429940 NFKBIEO00221 500 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 HIP1RO75146 1068 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 VAMP7P51809 220 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 UBXN2AP68543 259 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 INTS8Q75QN2 995 aaKnown RBP16.12■□□□□ 0.17
LINC00839-202ENST00000429940 SLC13A5Q86YT5 568 aaPredicted RBP16.12■□□□□ 0.17
LINC00839-202ENST00000429940 CD101Q93033 1021 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 NOD2Q9HC29 1040 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 FAM198AQ9UFP1 575 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 BAIAP2L1Q9UHR4 511 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 PRR12Q9ULL5 1215 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 K7ENM7 598 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 SPOPO43791 374 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 MTA2O94776 668 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 SGPL1O95470 568 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 RARAP10276 462 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 KCNJ1P48048 391 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 GCLMP48507 274 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 PPP3CAQ08209 521 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 DACT2Q5SW24 774 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 MFSD5Q6N075 450 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 SPICE1Q8N0Z3 855 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 DYDC1Q8WWB3 177 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 PCDHB18PQ96TA0 734 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 STRA6Q9BX79 667 aa16.12■□□□□ 0.17
LINC00839-202ENST00000429940 MYH11P35749 1972 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 ARHGEF35A5YM69 484 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 MUTP22033 750 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 PDE6CP51160 858 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 RBM5P52756 815 aaKnown RBP eCLIP16.11■□□□□ 0.17
LINC00839-202ENST00000429940 CALCOCO2Q13137 446 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 MYBPC2Q14324 1141 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 EPC2Q52LR7 807 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 EXOC3L1Q86VI1 746 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 SUPT20HQ8NEM7 779 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 TCP11Q8WWU5 503 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 BTBD6Q96KE9 485 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 ROPN1BQ9BZX4 212 aaPredicted RBP16.11■□□□□ 0.17
LINC00839-202ENST00000429940 UNC45AQ9H3U1 944 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 ROPN1Q9HAT0 212 aaPredicted RBP16.11■□□□□ 0.17
LINC00839-202ENST00000429940 HOMER3Q9NSC5 361 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 ABCF3Q9NUQ8 709 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 ZBTB12Q9Y330 459 aaPredicted RBP16.11■□□□□ 0.17
LINC00839-202ENST00000429940 TISP43B9A030 160 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 ECEL1O95672 775 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 CLTAP09496 248 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 CHRNB2P17787 502 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 SIX1Q15475 284 aaPredicted RBP16.11■□□□□ 0.17
LINC00839-202ENST00000429940 LONRF1Q17RB8 773 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 RNF207Q6ZRF8 634 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 TRMT10CQ7L0Y3 403 aaKnown RBP16.11■□□□□ 0.17
LINC00839-202ENST00000429940 OTUD6AQ7L8S5 288 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 TBC1D1Q86TI0 1168 aaPredicted RBP16.11■□□□□ 0.17
LINC00839-202ENST00000429940 NOP9Q86U38 636 aaKnown RBP16.11■□□□□ 0.17
LINC00839-202ENST00000429940 CPNE8Q86YQ8 564 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 ZNF564Q8TBZ8 553 aaPredicted RBP16.11■□□□□ 0.17
LINC00839-202ENST00000429940 EPS8L1Q8TE68 723 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms