RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 KIAA1755Q5JYT7 1200 aa8.65□□□□□ -1.03
HPS4-205ENST00000429411 MCTP2Q6DN12 878 aa8.65□□□□□ -1.03
HPS4-205ENST00000429411 FAM47EQ6ZV65 393 aa8.65□□□□□ -1.03
HPS4-205ENST00000429411 CPNE8Q86YQ8 564 aa8.65□□□□□ -1.03
HPS4-205ENST00000429411 CCDC197Q8NCU1 140 aa8.65□□□□□ -1.03
HPS4-205ENST00000429411 DHX38Q92620 1227 aaKnown RBP8.65□□□□□ -1.03
HPS4-205ENST00000429411 SEC16BQ96JE7 1060 aa8.65□□□□□ -1.03
HPS4-205ENST00000429411 SEMA4AQ9H3S1 761 aa8.65□□□□□ -1.03
HPS4-205ENST00000429411 RAVER2Q9HCJ3 691 aaKnown RBP8.65□□□□□ -1.03
HPS4-205ENST00000429411 TTC7AQ9ULT0 858 aaPredicted RBP8.65□□□□□ -1.03
HPS4-205ENST00000429411 MRPL11Q9Y3B7 192 aaKnown RBP8.65□□□□□ -1.03
HPS4-205ENST00000429411 POC1B-GALNT4F8VUJ3 575 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 TGFB1I1O43294 461 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 LCA5LO95447 670 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 MAPK4P31152 587 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 NT5C2P49902 561 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 IFI35P80217 286 aaPredicted RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 QPCTQ16769 361 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ZNF394Q53GI3 561 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 NUGGCQ68CJ6 796 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 CCDC91Q7Z6B0 441 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 C7orf43Q8WVR3 580 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 FAM163AQ96GL9 167 aaPredicted RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 LBHD1Q9BQE6 289 aaPredicted RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 PLVAPQ9BX97 442 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 UNC45AQ9H3U1 944 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 TOPORSQ9NS56 1045 aaPredicted RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 TRAF3IP3Q9Y228 551 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 SMTNP53814 917 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 GPC5P78333 572 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 MTA1Q13330 715 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 LDHDQ86WU2 507 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ARHGEF19Q8IW93 802 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 CCDC13Q8IYE1 715 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ETNPPLQ8TBG4 499 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ZNF564Q8TBZ8 553 aaPredicted RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 ALG3Q92685 438 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 SH3GL2Q99962 352 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ERP44Q9BS26 406 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 WDR18Q9BV38 432 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ZNF341Q9BYN7 854 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 WDR11Q9BZH6 1224 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 SLITRK6Q9H5Y7 841 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 NYAP2Q9P242 653 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ANKFY1Q9P2R3 1169 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 CNOT8Q9UFF9 292 aaKnown RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 SNHG28P0DPA3 235 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 EZRP15311 586 aaKnown RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 SREBF1P36956 1147 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 HSPA9P38646 679 aaKnown RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 C1QTNF8P60827 252 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ITGB3BPQ13352 177 aaPredicted RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 NAA25Q14CX7 972 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 PHLDB3Q6NSJ2 640 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 HAUS6Q7Z4H7 955 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 TMC3Q7Z5M5 1100 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 KIRREL3Q8IZU9 778 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 XXYLT1Q8NBI6 393 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ZSWIM2Q8NEG5 633 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ACTRT1Q8TDG2 376 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 HVCN1Q96D96 273 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ZNF668Q96K58 619 aaPredicted RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 NSRP1Q9H0G5 558 aaKnown RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 SUCLA2Q9P2R7 463 aaPredicted RBP8.64□□□□□ -1.03
HPS4-205ENST00000429411 FAM198AQ9UFP1 575 aa8.64□□□□□ -1.03
HPS4-205ENST00000429411 ECEL1O95672 775 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 STX2P32856 288 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 DGKZQ13574 1117 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 SEPT14Q6ZU15 432 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 CYFIP1Q7L576 1253 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 PODNQ7Z5L7 613 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 SLC47A2Q86VL8 602 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 CBWD2Q8IUF1 395 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 SRRM1Q8IYB3 904 aaKnown RBP8.63□□□□□ -1.03
HPS4-205ENST00000429411 CPA5Q8WXQ8 436 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 ACCSQ96QU6 501 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 KLC4Q9NSK0 619 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 DDX20Q9UHI6 824 aaKnown RBP8.63□□□□□ -1.03
HPS4-205ENST00000429411 PASKQ96RG2 1323 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 KRT15P19012 456 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 HOXD13P35453 343 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 CLK2P49760 499 aaKnown RBP8.63□□□□□ -1.03
HPS4-205ENST00000429411 LLGL2Q6P1M3 1020 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 RNF207Q6ZRF8 634 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 ZNF720Q7Z2F6 126 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 CCDC63Q8NA47 563 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 KIFAP3Q92845 792 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 RNF25Q96BH1 459 aaPredicted RBP8.63□□□□□ -1.03
HPS4-205ENST00000429411 CEP170P1Q96L14 293 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 C9orf72Q96LT7 481 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 PWWP2AQ96N64 755 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 NT5C1BQ96P26 610 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 FAM213AQ9BRX8 229 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 TMEM39BQ9GZU3 492 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 HSPBP1Q9NZL4 362 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 PCDHA2Q9Y5H9 948 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 MYO3BQ8WXR4 1341 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 PI4K2BG5E9Z4 385 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 TOMM70O94826 608 aa8.63□□□□□ -1.03
HPS4-205ENST00000429411 PARNO95453 639 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms