RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 RNPEPQ9H4A4 650 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 TUT1Q9H6E5 874 aaKnown RBP12.35□□□□□ -0.43
CECR3-201ENST00000428828 KIF9Q9HAQ2 790 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 PAK6Q9NQU5 681 aaPredicted RBP12.35□□□□□ -0.43
CECR3-201ENST00000428828 ARHGEF35A5YM69 484 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 SLC26A4O43511 780 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 HSF2BPO75031 334 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 EYA4O95677 639 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 HOXD8P13378 290 aaPredicted RBP12.35□□□□□ -0.43
CECR3-201ENST00000428828 MUTP22033 750 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 PURAQ00577 322 aaKnown RBP12.35□□□□□ -0.43
CECR3-201ENST00000428828 LRRC41Q15345 812 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 GLE1Q53GS7 698 aaKnown RBP12.35□□□□□ -0.43
CECR3-201ENST00000428828 XKR3Q5GH77 459 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 RNF187Q5TA31 235 aaPredicted RBP12.35□□□□□ -0.43
CECR3-201ENST00000428828 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 SV2BQ7L1I2 683 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 GPBP1Q86WP2 473 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 KLHL23Q8NBE8 558 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 CEP170P1Q96L14 293 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 RUFY1Q96T51 708 aa12.35□□□□□ -0.43
CECR3-201ENST00000428828 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.35□□□□□ -0.43
CECR3-201ENST00000428828 EME2A4GXA9 379 aaPredicted RBP12.34□□□□□ -0.43
CECR3-201ENST00000428828 USO1O60763 962 aaKnown RBP12.34□□□□□ -0.43
CECR3-201ENST00000428828 SMNDC1O75940 238 aaKnown RBP eCLIP12.34□□□□□ -0.43
CECR3-201ENST00000428828 RTN3O95197 1032 aaPredicted RBP12.34□□□□□ -0.43
CECR3-201ENST00000428828 LYPLA2O95372 231 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 ASGR1P07306 291 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 RARRES1P49788 294 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 IGBP1P78318 339 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 CACNB1Q02641 598 aaPredicted RBP12.34□□□□□ -0.43
CECR3-201ENST00000428828 RBL2Q08999 1139 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 PDCLQ13371 301 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
CECR3-201ENST00000428828 PNOCQ13519 176 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 KIAA0753Q2KHM9 967 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 TTMPQ5BVD1 217 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 CAPRIN2Q6IMN6 1127 aaKnown RBP12.34□□□□□ -0.43
CECR3-201ENST00000428828 MAEAQ7L5Y9 396 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 DYMQ7RTS9 669 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 APTXQ7Z2E3 356 aaKnown RBP12.34□□□□□ -0.43
CECR3-201ENST00000428828 CCDC170Q8IYT3 715 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 TRAPPC12Q8WVT3 735 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 PAGE5Q96GU1 130 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 SPAG5Q96R06 1193 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 CUEDC2Q9H467 287 aa12.34□□□□□ -0.43
CECR3-201ENST00000428828 NPHP3-ACAD11A0A0J9YXS1 232 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 C5orf60A6NFR6 353 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 STBD1O95210 358 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 F2P00734 622 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 KRT18P05783 430 aaKnown RBP12.33□□□□□ -0.44
CECR3-201ENST00000428828 SARSP49591 514 aaKnown RBP12.33□□□□□ -0.44
CECR3-201ENST00000428828 PSEN2P49810 448 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 SLC12A3P55017 1021 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
CECR3-201ENST00000428828 MFSD10Q14728 455 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 CCDC38Q502W7 563 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 ANKRD20A8PQ5CZ79 823 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 OTUD6AQ7L8S5 288 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 ARFGAP2Q8N6H7 521 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 KLHDC9Q8NEP7 349 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 TRIM58Q8NG06 486 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 ATP8B4Q8TF62 1192 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 ZFAND2BQ8WV99 257 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 VTI1AQ96AJ9 217 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 ARMC5Q96C12 935 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 ZBTB10Q96DT7 871 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 FAM167AQ96KS9 214 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 MMS19Q96T76 1030 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 MTRQ99707 1265 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 RUSC1Q9BVN2 902 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 POLD4Q9HCU8 107 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 CYP26B1Q9NR63 512 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 NRBP2Q9NSY0 501 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 KIAA0100Q14667 2235 aaKnown RBP12.33□□□□□ -0.44
CECR3-201ENST00000428828 MDH1P40925 334 aaKnown RBP12.33□□□□□ -0.44
CECR3-201ENST00000428828 SLC26A2P50443 739 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 LMNB2Q03252 620 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 CUL4BQ13620 913 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 POSTNQ15063 836 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 BZW1Q7L1Q6 419 aaKnown RBP12.33□□□□□ -0.44
CECR3-201ENST00000428828 MREGQ8N565 214 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 SYT2Q8N9I0 419 aaPredicted RBP12.33□□□□□ -0.44
CECR3-201ENST00000428828 PCSK9Q8NBP7 692 aaKnown RBP12.33□□□□□ -0.44
CECR3-201ENST00000428828 MTG1Q9BT17 334 aaPredicted RBP12.33□□□□□ -0.44
CECR3-201ENST00000428828 KDM4CQ9H3R0 1056 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 CENPHQ9H3R5 247 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 ANKEF1Q9NU02 776 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 KBTBD4Q9NVX7 518 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 DBR1Q9UK59 544 aaKnown RBP12.33□□□□□ -0.44
CECR3-201ENST00000428828 PCDHA5Q9Y5H7 936 aa12.33□□□□□ -0.44
CECR3-201ENST00000428828 MYMKA6NI61 221 aa12.32□□□□□ -0.44
CECR3-201ENST00000428828 HMGB1P1B2RPK0 211 aaPredicted RBP12.32□□□□□ -0.44
CECR3-201ENST00000428828 KBTBD13C9JR72 458 aa12.32□□□□□ -0.44
CECR3-201ENST00000428828 ABLIM1O14639 778 aa12.32□□□□□ -0.44
CECR3-201ENST00000428828 GSTA1P08263 222 aa12.32□□□□□ -0.44
CECR3-201ENST00000428828 INSRRP14616 1297 aa12.32□□□□□ -0.44
CECR3-201ENST00000428828 FERP16591 822 aa12.32□□□□□ -0.44
CECR3-201ENST00000428828 BMP6P22004 513 aa12.32□□□□□ -0.44
CECR3-201ENST00000428828 CST5P28325 142 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms