RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PALD1Q9ULE6 856 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 COA3Q9Y2R0 106 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-205ENST00000424674 X6R8D5 127 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 FAM227AF5H4B4 570 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 K7ESM1 405 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 PRODHO43272 600 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 AP1G1O43747 822 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 FKBP9O95302 570 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 IGHDP01880 384 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 PYGLP06737 847 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 PABPC1P11940 636 aaKnown RBP4.25□□□□□ -1.73
SF3B1-205ENST00000424674 RPL13P26373 211 aaKnown RBP4.25□□□□□ -1.73
SF3B1-205ENST00000424674 SMARCA1P28370 1054 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 BCL6P41182 706 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 LSSP48449 732 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 TDO2P48775 406 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 GFRA1P56159 465 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 TESK1Q15569 626 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 TAF12Q16514 161 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 CCDC38Q502W7 563 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 FKBP15Q5T1M5 1219 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 PIK3R6Q5UE93 754 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 LMBRD2Q68DH5 695 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-205ENST00000424674 CD300LDQ6UXZ3 194 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 NSMFQ6X4W1 530 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 DBX2Q6ZNG2 339 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 CCDC129Q6ZRS4 1044 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 FKBP9P1Q75LS8 142 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 PDZD4Q76G19 769 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-205ENST00000424674 CEP68Q76N32 757 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 FGD2Q7Z6J4 655 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 MILR1Q7Z6M3 343 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 OR2C3Q8N628 320 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 KYQ8NBH2 561 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 KREMEN2Q8NCW0 462 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 SLC30A5Q8TAD4 765 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 ADAMTS17Q8TE56 1095 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 HVCN1Q96D96 273 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 TMEM169Q96HH4 297 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 WNK4Q96J92 1243 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 CCDC140Q96MF4 163 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 RIPOR3Q96MK2 946 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 TREX2Q9BQ50 279 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-205ENST00000424674 KRTAP4-5Q9BYR2 181 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 FBXL7Q9UJT9 491 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 JAG2Q9Y219 1238 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 INVSQ9Y283 1065 aa4.25□□□□□ -1.73
SF3B1-205ENST00000424674 SYNDIG1LA6NDD5 238 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 TRIM64A6NGJ6 449 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 TRIM64BA6NI03 449 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 A6NNZ2 444 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 B4DLN1 442 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 C19orf81C9J6K1 198 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 EYA2O00167 538 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 XPOTO43592 962 aaKnown RBP4.24□□□□□ -1.73
SF3B1-205ENST00000424674 GAS7O60861 476 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 TIPRLO75663 272 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 C6orf222P0C671 652 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-205ENST00000424674 GYS1P13807 737 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 KCNA2P16389 499 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 XPAP23025 273 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-205ENST00000424674 PPM1AP35813 382 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 LTBRP36941 435 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 ADCYAP1R1P41586 468 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 STAT5AP42229 794 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 ATXN1P54253 815 aaKnown RBP4.24□□□□□ -1.73
SF3B1-205ENST00000424674 ITGA1P56199 1179 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 SESN3P58005 492 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 SEMA5AQ13591 1074 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 CHRNA2Q15822 529 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 HECTD3Q5T447 861 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 ZCCHC8Q6NZY4 707 aaKnown RBP4.24□□□□□ -1.73
SF3B1-205ENST00000424674 PGM2L1Q6PCE3 622 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 DARS2Q6PI48 645 aaKnown RBP4.24□□□□□ -1.73
SF3B1-205ENST00000424674 RFX8Q6ZV50 586 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 NEK10Q6ZWH5 1172 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 DDX53Q86TM3 631 aaKnown RBP4.24□□□□□ -1.73
SF3B1-205ENST00000424674 PCYOX1LQ8NBM8 494 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 FAM156AQ8NDB6 213 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 RCBTB1Q8NDN9 531 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 TRAPPC12Q8WVT3 735 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 CHAMP1Q96JM3 812 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 MAGEB10Q96LZ2 347 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-205ENST00000424674 TBCBQ99426 244 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 MAP3K14Q99558 947 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 SYT3Q9BQG1 590 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 TTLL2Q9BWV7 592 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 CHMP4BQ9H444 224 aaKnown RBP4.24□□□□□ -1.73
SF3B1-205ENST00000424674 BRD9Q9H8M2 597 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 PCDHA2Q9Y5H9 948 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 DUSP10Q9Y6W6 482 aa4.24□□□□□ -1.73
SF3B1-205ENST00000424674 SETD1BQ9UPS6 1966 aaKnown RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 KLHL33A6NCF5 533 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 B4E171 279 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 F5H0A9 414 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 H7BY64 318 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 DLX3O60479 287 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 MSCO60682 206 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms