RNA–Protein interactions for RNA: ENST00000424062.1

POLR1B-205, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-205ENST00000424062 NCAPHQ15003 741 aa12.98□□□□□ -0.33
POLR1B-205ENST00000424062 UVSSAQ2YD98 709 aa12.98□□□□□ -0.33
POLR1B-205ENST00000424062 DCAF4L1Q3SXM0 396 aa12.98□□□□□ -0.33
POLR1B-205ENST00000424062 ZNF568Q3ZCX4 644 aa12.98□□□□□ -0.33
POLR1B-205ENST00000424062 SLC39A4Q6P5W5 647 aa12.98□□□□□ -0.33
POLR1B-205ENST00000424062 SLC27A1Q6PCB7 646 aa12.98□□□□□ -0.33
POLR1B-205ENST00000424062 ZC3H3Q8IXZ2 948 aaKnown RBP12.98□□□□□ -0.33
POLR1B-205ENST00000424062 SEPT8Q92599 483 aa12.98□□□□□ -0.33
POLR1B-205ENST00000424062 TRIM6Q9C030 488 aaPredicted RBP12.98□□□□□ -0.33
POLR1B-205ENST00000424062 PDZD7Q9H5P4 517 aa12.98□□□□□ -0.33
POLR1B-205ENST00000424062 ZNF233A6NK53 670 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 TULP1O00294 542 aaPredicted RBP12.97□□□□□ -0.33
POLR1B-205ENST00000424062 OGTO15294 1046 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 NPTXRO95502 500 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 TPM2P07951 284 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 SKIP12755 728 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 SPAG1Q07617 926 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 CCDC40Q4G0X9 1142 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 EEF1DP3Q658K8 133 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 TWF2Q6IBS0 349 aaKnown RBP12.97□□□□□ -0.33
POLR1B-205ENST00000424062 FRMD5Q7Z6J6 570 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 CDR2LQ86X02 465 aaPredicted RBP12.97□□□□□ -0.33
POLR1B-205ENST00000424062 FAM186BQ8IYM0 893 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 RPUSD2Q8IZ73 545 aaKnown RBP12.97□□□□□ -0.33
POLR1B-205ENST00000424062 GPD1LQ8N335 351 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 TMEM199Q8N511 208 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 RDH13Q8NBN7 331 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 EEF2KMTQ96G04 330 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 FAM213AQ9BRX8 229 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 MKNK1Q9BUB5 465 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 FTHL17Q9BXU8 183 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 IFIH1Q9BYX4 1025 aaKnown RBP12.97□□□□□ -0.33
POLR1B-205ENST00000424062 METTL14Q9HCE5 456 aaKnown RBP12.97□□□□□ -0.33
POLR1B-205ENST00000424062 SAMSN1Q9NSI8 373 aaKnown RBP12.97□□□□□ -0.33
POLR1B-205ENST00000424062 SIP14410 1827 aa12.97□□□□□ -0.33
POLR1B-205ENST00000424062 GOLGA8IPA6NC78 632 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 GOLGA8JA6NMD2 632 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 KCNJ18B7U540 433 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 MAPK13O15264 365 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 SLC16A3O15427 465 aaKnown RBP12.96□□□□□ -0.33
POLR1B-205ENST00000424062 EVI5O60447 810 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 NBNO60934 754 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 CLTAP09496 248 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 KRT13P13646 458 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 EEF1GP26641 437 aaKnown RBP12.96□□□□□ -0.33
POLR1B-205ENST00000424062 MTIF2P46199 727 aaKnown RBP12.96□□□□□ -0.33
POLR1B-205ENST00000424062 KCNJ12Q14500 433 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 GSE1Q14687 1217 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 MBTPS1Q14703 1052 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 PLEKHG4Q58EX7 1191 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 LRRC55Q6ZSA7 311 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 THNSL1Q8IYQ7 743 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 C7orf61Q8IZ16 206 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 DPF3Q92784 378 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 APBB2Q92870 758 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 TRIM43Q96BQ3 446 aaPredicted RBP12.96□□□□□ -0.33
POLR1B-205ENST00000424062 SAAL1Q96ER3 474 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 SCLYQ96I15 445 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 CCDC94Q9BW85 323 aaPredicted RBP12.96□□□□□ -0.33
POLR1B-205ENST00000424062 WNT8AQ9H1J5 351 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 CDT1Q9H211 546 aa12.96□□□□□ -0.33
POLR1B-205ENST00000424062 ARMCX3Q9UH62 379 aaPredicted RBP12.96□□□□□ -0.33
POLR1B-205ENST00000424062 BRCA2P51587 3418 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 UMODL1Q5DID0 1318 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 ABLIM1O14639 778 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 AKAP3O75969 853 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 CXCL10P02778 98 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 STAG3L1P0CL83 205 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 CASP4P49662 377 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 ACOT2P49753 483 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 POU5F1Q01860 360 aaKnown RBP12.95□□□□□ -0.34
POLR1B-205ENST00000424062 SNRNP35Q16560 246 aaKnown RBP12.95□□□□□ -0.34
POLR1B-205ENST00000424062 HSP90AA4PQ58FG1 418 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 TCP11X2Q5H9J9 407 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 MFSD5Q6N075 450 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 DEFB128Q7Z7B8 93 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 USP37Q86T82 979 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 CNOT6LQ96LI5 555 aaKnown RBP12.95□□□□□ -0.34
POLR1B-205ENST00000424062 FBXL18Q96ME1 805 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 ACAP3Q96P50 834 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 ADAM2Q99965 735 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 EIF2AQ9BY44 585 aaKnown RBP12.95□□□□□ -0.34
POLR1B-205ENST00000424062 OSBPL7Q9BZF2 842 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 HAPLN2Q9GZV7 340 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 TMX1Q9H3N1 280 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 RPF1Q9H9Y2 349 aaKnown RBP12.95□□□□□ -0.34
POLR1B-205ENST00000424062 PCDHB2Q9Y5E7 798 aa12.95□□□□□ -0.34
POLR1B-205ENST00000424062 SERPINC1P01008 464 aa12.94□□□□□ -0.34
POLR1B-205ENST00000424062 ZNF18P17022 549 aa12.94□□□□□ -0.34
POLR1B-205ENST00000424062 GRM5P41594 1212 aa12.94□□□□□ -0.34
POLR1B-205ENST00000424062 RAB27AP51159 221 aa12.94□□□□□ -0.34
POLR1B-205ENST00000424062 YARSP54577 528 aaKnown RBP12.94□□□□□ -0.34
POLR1B-205ENST00000424062 OSTNP61366 133 aa12.94□□□□□ -0.34
POLR1B-205ENST00000424062 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
POLR1B-205ENST00000424062 DSC3Q14574 896 aa12.94□□□□□ -0.34
POLR1B-205ENST00000424062 GPNMBQ14956 572 aa12.94□□□□□ -0.34
POLR1B-205ENST00000424062 SURF1Q15526 300 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms