RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 TRIP11Q15643 1979 aa20.48■□□□□ 0.87
SREBF1-206ENST00000423161 F8W810 466 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 NR1I2O75469 434 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 GLUD2P49448 558 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 MRE11P49959 708 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 ZNF174Q15697 407 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 GPR149Q86SP6 731 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 ZBTB8OSQ8IWT0 167 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 UBALD2Q8IYN6 164 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 RNF168Q8IYW5 571 aaPredicted RBP20.47■□□□□ 0.87
SREBF1-206ENST00000423161 ZDHHC14Q8IZN3 488 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 RPS6KC1Q96S38 1066 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 PRMT7Q9NVM4 692 aaPredicted RBP20.47■□□□□ 0.87
SREBF1-206ENST00000423161 PARP2Q9UGN5 583 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 USTQ9Y2C2 406 aa20.47■□□□□ 0.87
SREBF1-206ENST00000423161 ZMYM2Q9UBW7 1377 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 A0A1B0GUA9 196 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 BRD1O95696 1058 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 EFEMP2O95967 443 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 ASGR2P07307 311 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 ADH1AP07327 375 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 RPA1P27694 616 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 HMGN5P82970 282 aaKnown RBP20.46■□□□□ 0.87
SREBF1-206ENST00000423161 GNL2Q13823 731 aaKnown RBP20.46■□□□□ 0.87
SREBF1-206ENST00000423161 TTC38Q5R3I4 469 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 CDCA2Q69YH5 1023 aaPredicted RBP20.46■□□□□ 0.87
SREBF1-206ENST00000423161 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 PLCD3Q8N3E9 789 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 PRIMPOLQ96LW4 560 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 PRRX2Q99811 253 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 COLEC11Q9BWP8 271 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 MAN1C1Q9NR34 630 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 KLK14Q9P0G3 267 aa20.46■□□□□ 0.87
SREBF1-206ENST00000423161 ARHGEF35A5YM69 484 aa20.45■□□□□ 0.86
SREBF1-206ENST00000423161 TEX28O15482 410 aa20.45■□□□□ 0.86
SREBF1-206ENST00000423161 VCPP55072 806 aaKnown RBP20.45■□□□□ 0.86
SREBF1-206ENST00000423161 GRIK3Q13003 919 aa20.45■□□□□ 0.86
SREBF1-206ENST00000423161 PADI6Q6TGC4 694 aa20.45■□□□□ 0.86
SREBF1-206ENST00000423161 CCDC149Q6ZUS6 474 aa20.45■□□□□ 0.86
SREBF1-206ENST00000423161 FAM184AQ8NB25 1140 aa20.45■□□□□ 0.86
SREBF1-206ENST00000423161 GSTCDQ8NEC7 633 aa20.45■□□□□ 0.86
SREBF1-206ENST00000423161 FBXO18Q8NFZ0 1043 aa20.45■□□□□ 0.86
SREBF1-206ENST00000423161 BSNDQ8WZ55 320 aa20.45■□□□□ 0.86
SREBF1-206ENST00000423161 ZSCAN31Q96LW9 406 aaPredicted RBP20.45■□□□□ 0.86
SREBF1-206ENST00000423161 LIMD1Q9UGP4 676 aa20.45■□□□□ 0.86
SREBF1-206ENST00000423161 GLUD1P00367 558 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 PDGFBP01127 241 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-206ENST00000423161 PTPN5P54829 565 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 DSG1Q02413 1049 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 FAM187BQ17R55 369 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 TMEM132AQ24JP5 1023 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 KIAA0319Q5VV43 1072 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 HAUS3Q68CZ6 603 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 FUT10Q6P4F1 479 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 C15orf39Q6ZRI6 1047 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 NOSTRINQ8IVI9 506 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 ACSF2Q96CM8 615 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-206ENST00000423161 C2orf40Q9H1Z8 148 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 SMOC2Q9H3U7 446 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 FZD8Q9H461 694 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 RXFP1Q9HBX9 757 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 SH2B1Q9NRF2 756 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-206ENST00000423161 DOCK8Q8NF50 2099 aa20.44■□□□□ 0.86
SREBF1-206ENST00000423161 N4BP3O15049 544 aa20.43■□□□□ 0.86
SREBF1-206ENST00000423161 CYP11B2P19099 503 aa20.43■□□□□ 0.86
SREBF1-206ENST00000423161 AVPR2P30518 371 aa20.43■□□□□ 0.86
SREBF1-206ENST00000423161 RBM25P49756 843 aaKnown RBP20.43■□□□□ 0.86
SREBF1-206ENST00000423161 ELMSAN1Q6PJG2 1045 aa20.43■□□□□ 0.86
SREBF1-206ENST00000423161 OTOP3Q7RTS5 596 aa20.43■□□□□ 0.86
SREBF1-206ENST00000423161 RABGGTAQ92696 567 aa20.43■□□□□ 0.86
SREBF1-206ENST00000423161 GPR62Q9BZJ7 368 aa20.43■□□□□ 0.86
SREBF1-206ENST00000423161 PDZD7Q9H5P4 517 aa20.43■□□□□ 0.86
SREBF1-206ENST00000423161 ADAM28Q9UKQ2 775 aa20.43■□□□□ 0.86
SREBF1-206ENST00000423161 NOL7Q9UMY1 257 aaKnown RBP20.43■□□□□ 0.86
SREBF1-206ENST00000423161 TTLL13PA6NNM8 815 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 PRKCBP05771 671 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 LIG1P18858 919 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 MUTP22033 750 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 CCT6AP40227 531 aaKnown RBP20.42■□□□□ 0.86
SREBF1-206ENST00000423161 NAMPTP43490 491 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 TRAPPC10P48553 1259 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 PRPF4BQ13523 1007 aaKnown RBP20.42■□□□□ 0.86
SREBF1-206ENST00000423161 NBR1Q14596 966 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 MAPK6Q16659 721 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 USP41Q3LFD5 358 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 CMASQ8NFW8 434 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-206ENST00000423161 DEPTORQ8TB45 409 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 B3GALT6Q96L58 329 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 CHST7Q9NS84 486 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 CACNG4Q9UBN1 327 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 DPP7Q9UHL4 492 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 VWA8A3KMH1 1905 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 CACNA1HO95180 2353 aa20.42■□□□□ 0.86
SREBF1-206ENST00000423161 MYH11P35749 1972 aa20.41■□□□□ 0.86
SREBF1-206ENST00000423161 MYBP10242 640 aa20.41■□□□□ 0.86
SREBF1-206ENST00000423161 FXR2P51116 673 aaKnown RBP eCLIP20.41■□□□□ 0.86
SREBF1-206ENST00000423161 TCF15Q12870 199 aa20.41■□□□□ 0.86
SREBF1-206ENST00000423161 TUSC3Q13454 348 aa20.41■□□□□ 0.86
SREBF1-206ENST00000423161 PPP2R5AQ15172 486 aa20.41■□□□□ 0.86
SREBF1-206ENST00000423161 KIF2CQ99661 725 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms