RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 PRRX2Q99811 253 aa5.63□□□□□ -1.51
LINC00397-201ENST00000422074 FZD1Q9UP38 647 aa5.63□□□□□ -1.51
LINC00397-201ENST00000422074 ZMYM3Q14202 1370 aa5.63□□□□□ -1.51
LINC00397-201ENST00000422074 TBKBP1A7MCY6 615 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 PPFIA4O75335 1185 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 PRKD3O94806 890 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 ADH4P08319 380 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 ERVK-21P61565 698 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 TMPRSS15P98073 1019 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 ADRM1Q16186 407 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 BMT2Q1RMZ1 405 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 PDZD4Q76G19 769 aaPredicted RBP5.62□□□□□ -1.51
LINC00397-201ENST00000422074 LDLRAD3Q86YD5 345 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 ZNF276Q8N554 614 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 WDR66Q8TBY9 1149 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 RIN2Q8WYP3 895 aaPredicted RBP5.62□□□□□ -1.51
LINC00397-201ENST00000422074 HOXB13Q92826 284 aaPredicted RBP5.62□□□□□ -1.51
LINC00397-201ENST00000422074 HAS1Q92839 578 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 CLIP3Q96DZ5 547 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 KCNH6Q9H252 994 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 BCO1Q9HAY6 547 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 IFT122Q9HBG6 1241 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 EDARQ9UNE0 448 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 HS3ST4Q9Y661 456 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 CADPSQ9ULU8 1353 aa5.62□□□□□ -1.51
LINC00397-201ENST00000422074 AHRRA9YTQ3 701 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 FAM20BO75063 409 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 RECQL4O94761 1208 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 HSP90B1P14625 803 aaKnown RBP5.61□□□□□ -1.51
LINC00397-201ENST00000422074 KRT4P19013 534 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 ZFP36P26651 326 aaKnown RBP5.61□□□□□ -1.51
LINC00397-201ENST00000422074 MTNR1BP49286 362 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 INHBCP55103 352 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 FAM47AQ5JRC9 791 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 PCSK4Q6UW60 755 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 ZNF627Q7L945 461 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 OR7D4Q8NG98 312 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 NEU4Q8WWR8 484 aaPredicted RBP5.61□□□□□ -1.51
LINC00397-201ENST00000422074 AHCYL2Q96HN2 611 aaKnown RBP5.61□□□□□ -1.51
LINC00397-201ENST00000422074 DCLRE1CQ96SD1 692 aaKnown RBP5.61□□□□□ -1.51
LINC00397-201ENST00000422074 SLC46A2Q9BY10 475 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 EPC1Q9H2F5 836 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 GREM2Q9H772 168 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 C14orf119Q9NWQ9 140 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 HDAC5Q9UQL6 1122 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 CHST2Q9Y4C5 530 aa5.61□□□□□ -1.51
LINC00397-201ENST00000422074 ATRNL1Q5VV63 1379 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 WDR33Q9C0J8 1336 aaKnown RBP5.6□□□□□ -1.51
LINC00397-201ENST00000422074 PRR5-ARHGAP8B1AHC4 643 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 DIRC3C9JPN6 131 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 PJA2O43164 708 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 ITGB1P05556 798 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 FLT3LGP49771 235 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 PTTG1IPP53801 180 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 SCAND1P57086 179 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 CDK17Q00537 523 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 PPP3CAQ08209 521 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 MFSD14BQ5SR56 506 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 PRAMEF14Q5SWL7 426 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 ANKS6Q68DC2 871 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 Q6ZVL8 140 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 ZNF572Q7Z3I7 529 aaPredicted RBP5.6□□□□□ -1.51
LINC00397-201ENST00000422074 XYLT1Q86Y38 959 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 SYT12Q8IV01 421 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 MDM1Q8TC05 714 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 TGFBRAP1Q8WUH2 860 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 CHFRQ96EP1 664 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 CEP95Q96GE4 821 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 FAM126AQ9BYI3 521 aaPredicted RBP5.6□□□□□ -1.51
LINC00397-201ENST00000422074 QRSL1Q9H0R6 528 aaKnown RBP5.6□□□□□ -1.51
LINC00397-201ENST00000422074 SLITRK6Q9H5Y7 841 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 FAM30AQ9NZY2 134 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 DKK2Q9UBU2 259 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 SORCS3Q9UPU3 1222 aa5.6□□□□□ -1.51
LINC00397-201ENST00000422074 REXO2Q9Y3B8 237 aaKnown RBP5.6□□□□□ -1.51
LINC00397-201ENST00000422074 AKR1B10O60218 316 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 ZSCAN20P17040 1043 aaPredicted RBP5.59□□□□□ -1.51
LINC00397-201ENST00000422074 MGAT1P26572 445 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 MCAMP43121 646 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 MALLQ13021 153 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 MUM1L1Q5H9M0 696 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 TOR2AQ5JU69 321 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 METRNLQ641Q3 311 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 FAM180AQ6UWF9 173 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 MENTQ9BUN1 341 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 ACE2Q9BYF1 805 aaPredicted RBP5.59□□□□□ -1.51
LINC00397-201ENST00000422074 IKZF4Q9H2S9 585 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 NRDE2Q9H7Z3 1164 aa5.59□□□□□ -1.51
LINC00397-201ENST00000422074 ZNF277Q9NRM2 450 aaPredicted RBP5.59□□□□□ -1.51
LINC00397-201ENST00000422074 RBM12Q9NTZ6 932 aaKnown RBP5.59□□□□□ -1.51
LINC00397-201ENST00000422074 COL4A3Q01955 1670 aa5.59□□□□□ -1.52
LINC00397-201ENST00000422074 GAGE12BA1L429 117 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 GAGE12HA6NDE8 117 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 TRIM75PA6NK02 468 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 LEFTY2O00292 366 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 IGSF3O75054 1194 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 SCAF4O95104 1147 aaKnown RBP5.58□□□□□ -1.52
LINC00397-201ENST00000422074 ALOX15P16050 662 aaPredicted RBP5.58□□□□□ -1.52
LINC00397-201ENST00000422074 CNGA1P29973 690 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 APOBEC3AP31941 199 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms