RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 MSTO1Q9BUK6 570 aa17.17■□□□□ 0.34
DDX55-203ENST00000421670 TRIM6Q9C030 488 aaPredicted RBP17.17■□□□□ 0.34
DDX55-203ENST00000421670 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
DDX55-203ENST00000421670 STYXL1Q9Y6J8 313 aa17.17■□□□□ 0.34
DDX55-203ENST00000421670 TDRD15B5MCY1 1934 aaKnown RBP17.16■□□□□ 0.34
DDX55-203ENST00000421670 A0A0B4J269 797 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 CALUO43852 315 aaPredicted RBP17.16■□□□□ 0.34
DDX55-203ENST00000421670 NR3C1P04150 777 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 PFKMP08237 780 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 RGS19P49795 217 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 LRRC63Q05C16 580 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 ZBTB41Q5SVQ8 909 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 TTI2Q6NXR4 508 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 LRSAM1Q6UWE0 723 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 GOLGA5Q8TBA6 731 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 TSG101Q99816 390 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 TSPYL2Q9H2G4 693 aaPredicted RBP17.16■□□□□ 0.34
DDX55-203ENST00000421670 NXF3Q9H4D5 531 aaKnown RBP17.16■□□□□ 0.34
DDX55-203ENST00000421670 FAM105AQ9NUU6 356 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 HSPBP1Q9NZL4 362 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 RWDD2AQ9UIY3 292 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 HES2Q9Y543 173 aa17.16■□□□□ 0.34
DDX55-203ENST00000421670 GOLGA8IPA6NC78 632 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 GOLGA8JA6NMD2 632 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 FAM189A1O60320 539 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 MCF2P10911 925 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 GARTP22102 1010 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 NR2F2P24468 414 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 MAGEA10P43363 369 aaPredicted RBP17.15■□□□□ 0.34
DDX55-203ENST00000421670 OSTNP61366 133 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 DCAF4L1Q3SXM0 396 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 SLFN12LQ6IEE8 588 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 OTOP2Q7RTS6 562 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 TMEM192Q8IY95 271 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 DUSP9Q99956 384 aaKnown RBP17.15■□□□□ 0.34
DDX55-203ENST00000421670 RGS18Q9NS28 235 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 CGNQ9P2M7 1197 aaKnown RBP17.15■□□□□ 0.34
DDX55-203ENST00000421670 AGO2Q9UKV8 859 aaKnown RBP17.15■□□□□ 0.34
DDX55-203ENST00000421670 PCDHB2Q9Y5E7 798 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 FNDC1Q4ZHG4 1894 aaPredicted RBP17.15■□□□□ 0.34
DDX55-203ENST00000421670 GBF1Q92538 1859 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.15■□□□□ 0.34
DDX55-203ENST00000421670 BICDL2A1A5D9 508 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 ERCC5P28715 1186 aaPredicted RBP17.15■□□□□ 0.34
DDX55-203ENST00000421670 TNFSF9P41273 254 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 ZNF445P59923 1031 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 SNRPFP62306 86 aaKnown RBP17.15■□□□□ 0.34
DDX55-203ENST00000421670 IKBKEQ14164 716 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 EDRF1Q3B7T1 1238 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 ZNF365Q70YC5 407 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 C12orf56Q8IXR9 622 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 SMG8Q8ND04 991 aaKnown RBP17.15■□□□□ 0.34
DDX55-203ENST00000421670 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.15■□□□□ 0.34
DDX55-203ENST00000421670 APOL6Q9BWW8 343 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 IPPQ9Y573 584 aa17.15■□□□□ 0.34
DDX55-203ENST00000421670 C9IYK1 514 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 ENPP3O14638 875 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 OGTO15294 1046 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 ATF7P17544 494 aaPredicted RBP17.14■□□□□ 0.33
DDX55-203ENST00000421670 ACOT2P49753 483 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.14■□□□□ 0.33
DDX55-203ENST00000421670 LRRC55Q6ZSA7 311 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 SLC24A5Q71RS6 500 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 APBB1IPQ7Z5R6 666 aaPredicted RBP17.14■□□□□ 0.33
DDX55-203ENST00000421670 RNF169Q8NCN4 708 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 LPPQ93052 612 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 FAM213AQ9BRX8 229 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 TRAIPQ9BWF2 469 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 TSPY26PQ9H489 355 aa17.14■□□□□ 0.33
DDX55-203ENST00000421670 A0A0U1RQF3 1178 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 MEIS3P2A8K0S8 358 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 H0YGN5 161 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 EXOC3O60645 756 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 ACTN1P12814 892 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 CASP4P49662 377 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 ZNF165P49910 485 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 ADAM9Q13443 819 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 NFIL3Q16649 462 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 TMEM240Q5SV17 173 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 CEP135Q66GS9 1140 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 PSRC1Q6PGN9 363 aaPredicted RBP17.13■□□□□ 0.33
DDX55-203ENST00000421670 SLC9A9Q8IVB4 645 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 GPD1LQ8N335 351 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 CSGALNACT2Q8N6G5 542 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 AOPEPQ8N6M6 819 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 XXYLT1Q8NBI6 393 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
DDX55-203ENST00000421670 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 C1orf112Q9NSG2 853 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 DMAC2Q9NW81 257 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 SNTG2Q9NY99 539 aa17.13■□□□□ 0.33
DDX55-203ENST00000421670 ABHD14A-ACY1A0A1B0GW23 586 aa17.12■□□□□ 0.33
DDX55-203ENST00000421670 ZBBXA8MT70 800 aa17.12■□□□□ 0.33
DDX55-203ENST00000421670 FGBP02675 491 aa17.12■□□□□ 0.33
DDX55-203ENST00000421670 STAG3L1P0CL83 205 aa17.12■□□□□ 0.33
DDX55-203ENST00000421670 AKAP5P24588 427 aa17.12■□□□□ 0.33
DDX55-203ENST00000421670 RAB27AP51159 221 aa17.12■□□□□ 0.33
DDX55-203ENST00000421670 WDR5P61964 334 aaKnown RBP17.12■□□□□ 0.33
DDX55-203ENST00000421670 DEFB103AP81534 67 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms