RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CCDC43Q96MW1 224 aaKnown RBP16.45■□□□□ 0.22
RPS28-201ENST00000417088 COLEC11Q9BWP8 271 aa16.45■□□□□ 0.22
RPS28-201ENST00000417088 TRIM6Q9C030 488 aaPredicted RBP16.45■□□□□ 0.22
RPS28-201ENST00000417088 POLR3FQ9H1D9 316 aaPredicted RBP16.45■□□□□ 0.22
RPS28-201ENST00000417088 TMEM60Q9H2L4 133 aa16.45■□□□□ 0.22
RPS28-201ENST00000417088 CCDC195A0A1B0GUA6 201 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 A0A1B0GUA9 196 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 POTEMA6NI47 508 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 USO1O60763 962 aaKnown RBP16.44■□□□□ 0.22
RPS28-201ENST00000417088 NR1I2O75469 434 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 NPTXRO95502 500 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 GLUD1P00367 558 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 SPATA31C1P0DKV0 1188 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 MYBP10242 640 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
RPS28-201ENST00000417088 SLC27A1Q6PCB7 646 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 HACE1Q8IYU2 909 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 GPR62Q9BZJ7 368 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 KCNK12Q9HB15 430 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 GPRC5CQ9NQ84 441 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 CHST7Q9NS84 486 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 C2orf16Q68DN1 1984 aa16.44■□□□□ 0.22
RPS28-201ENST00000417088 N4BP1O75113 896 aaKnown RBP16.43■□□□□ 0.22
RPS28-201ENST00000417088 ST3GAL1Q11201 340 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 TDGQ13569 410 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 TRIM29Q14134 588 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 FUT10Q6P4F1 479 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 CYP26C1Q6V0L0 522 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 MAEAQ7L5Y9 396 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 CATSPER3Q86XQ3 398 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 B3GALT6Q96L58 329 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 RHOBTB2Q9BYZ6 727 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 MFSD1Q9H3U5 465 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 WDR6Q9NNW5 1121 aaKnown RBP16.43■□□□□ 0.22
RPS28-201ENST00000417088 KLK14Q9P0G3 267 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 DPP7Q9UHL4 492 aa16.43■□□□□ 0.22
RPS28-201ENST00000417088 LRRIQ4A6NIV6 560 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 ST18O60284 1047 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 GFRA3O60609 400 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 RFPL2O75678 378 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 SPATA31D3P0C874 917 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 ATP2B1P20020 1258 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 MCM7P33993 719 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 CLCN5P51795 746 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 NEK4P51957 841 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 GRIK3Q13003 919 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 ELMSAN1Q6PJG2 1045 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 SPATA31D4Q6ZUB0 917 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 PALB2Q86YC2 1186 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 HDAC7Q8WUI4 952 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 RABGGTAQ92696 567 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 ZNF707Q96C28 371 aaPredicted RBP16.42■□□□□ 0.22
RPS28-201ENST00000417088 FZD8Q9H461 694 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 TUFT1Q9NNX1 390 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 PARP2Q9UGN5 583 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 DUSP12Q9UNI6 340 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 PTPRZ1P23471 2315 aaPredicted RBP16.42■□□□□ 0.22
RPS28-201ENST00000417088 PLXNA3P51805 1871 aa16.42■□□□□ 0.22
RPS28-201ENST00000417088 TDRD15B5MCY1 1934 aaKnown RBP16.41■□□□□ 0.22
RPS28-201ENST00000417088 ZMYM2Q9UBW7 1377 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 TTLL13PA6NNM8 815 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 MED24O75448 989 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 PAPLNO95428 1278 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 C1RP00736 705 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 NEFLP07196 543 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 NPR3P17342 541 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 USP41Q3LFD5 358 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 CWF19L1Q69YN2 538 aaKnown RBP16.41■□□□□ 0.22
RPS28-201ENST00000417088 LILRA6Q6PI73 481 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 GPR65Q8IYL9 337 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 MCPH1Q8NEM0 835 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 FLCNQ8NFG4 579 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 SMG7Q92540 1137 aaKnown RBP16.41■□□□□ 0.22
RPS28-201ENST00000417088 PRIMPOLQ96LW4 560 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 NACC1Q96RE7 527 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 PLEKHA4Q9H4M7 779 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 PRMT7Q9NVM4 692 aaPredicted RBP16.41■□□□□ 0.22
RPS28-201ENST00000417088 FNIP2Q9P278 1114 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 IGSF9Q9P2J2 1179 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 CACNG4Q9UBN1 327 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 ADAM28Q9UKQ2 775 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 CLUHO75153 1309 aa16.41■□□□□ 0.22
RPS28-201ENST00000417088 PROB1E7EW31 1015 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 TGM5O43548 720 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 RPL17P18621 184 aaKnown RBP16.4■□□□□ 0.22
RPS28-201ENST00000417088 GBP2P32456 591 aaPredicted RBP16.4■□□□□ 0.22
RPS28-201ENST00000417088 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 FAM187BQ17R55 369 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 CDCA2Q69YH5 1023 aaPredicted RBP16.4■□□□□ 0.22
RPS28-201ENST00000417088 GLYCTKQ8IVS8 523 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 RSAD2Q8WXG1 361 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 RIN2Q8WYP3 895 aaPredicted RBP16.4■□□□□ 0.22
RPS28-201ENST00000417088 BSNDQ8WZ55 320 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 STAMQ92783 540 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 MYADMQ96S97 322 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 PAAF1Q9BRP4 392 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 POLR3CQ9BUI4 534 aaPredicted RBP16.4■□□□□ 0.22
RPS28-201ENST00000417088 NT5C3AQ9H0P0 336 aa16.4■□□□□ 0.22
RPS28-201ENST00000417088 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.4■□□□□ 0.222e-11■■□□□ 13.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms