RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 PVALEFA0A1B0GWK0 134 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 CCDC78A2IDD5 438 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 TTI1O43156 1089 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 TAC1P20366 129 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 HUNKP57058 714 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 CAPRIN1Q14444 709 aaKnown RBP11.28□□□□□ -0.6
COL12A1-203ENST00000416123 SGMS1Q86VZ5 419 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 SEPT5Q99719 369 aaPredicted RBP11.28□□□□□ -0.6
COL12A1-203ENST00000416123 CYP26B1Q9NR63 512 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 RNF14Q9UBS8 474 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 VEPH1Q14D04 833 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 EPHA7Q15375 998 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 AMHR2Q16671 573 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 KCNV1Q6PIU1 500 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 APPL2Q8NEU8 664 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 KIFC3Q9BVG8 833 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 ANLNQ9NQW6 1124 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 EXOSC10Q01780 885 aaKnown RBP11.28□□□□□ -0.6
COL12A1-203ENST00000416123 CUL1Q13616 776 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 RMDN1Q96DB5 314 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 SMARCAD1Q9H4L7 1026 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 EPB41L4AQ9HCS5 686 aaPredicted RBP11.28□□□□□ -0.6
COL12A1-203ENST00000416123 AFDNP55196 1824 aaKnown RBP11.27□□□□□ -0.6
COL12A1-203ENST00000416123 PRKCEQ02156 737 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 FBXL13Q8NEE6 735 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 LPAR1Q92633 364 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 LBHD1Q9BQE6 289 aaPredicted RBP11.27□□□□□ -0.6
COL12A1-203ENST00000416123 STAP1Q9ULZ2 295 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 IQGAP1P46940 1657 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 ESYT3A0FGR9 886 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 E2F5Q15329 346 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 PPM1NQ8N819 430 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 OR6P1Q8NGX9 317 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 CYTH2Q99418 400 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 PARK7Q99497 189 aaKnown RBP11.27□□□□□ -0.6
COL12A1-203ENST00000416123 PHF20Q9BVI0 1012 aa11.27□□□□□ -0.6
COL12A1-203ENST00000416123 SPAG7O75391 227 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 RALAP11233 206 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 OR1G1P47890 313 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 PAPOLAP51003 745 aaKnown RBP11.27□□□□□ -0.61
COL12A1-203ENST00000416123 NUGGCQ68CJ6 796 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 PIP4K2CQ8TBX8 421 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 PI4K2AQ9BTU6 479 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 PRRG1O14668 218 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 ZNF185O15231 689 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 KCNN4O15554 427 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 GH1P01241 217 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 FBXW4P57775 412 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 ADCY2Q08462 1091 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 ATG16L1Q676U5 607 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 GPBP1L1Q9HC44 474 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-203ENST00000416123 DONSONQ9NYP3 566 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 TPX2Q9ULW0 747 aaKnown RBP11.27□□□□□ -0.61
COL12A1-203ENST00000416123 KLK7P49862 253 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.61
COL12A1-203ENST00000416123 LCA5Q86VQ0 697 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 SRRM1Q8IYB3 904 aaKnown RBP11.27□□□□□ -0.61
COL12A1-203ENST00000416123 ELAC2Q9BQ52 826 aaKnown RBP11.27□□□□□ -0.61
COL12A1-203ENST00000416123 ADAM33Q9BZ11 813 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 SLC13A4Q9UKG4 626 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 PCDHB7Q9Y5E2 793 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 CEP170BQ9Y4F5 1589 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-203ENST00000416123 APOL1O14791 398 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 HOXA7P31268 230 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-203ENST00000416123 PHEXP78562 749 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 MTF1Q14872 753 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 ANKMY2Q8IV38 441 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-203ENST00000416123 USP27XA6NNY8 438 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 SMARCA1P28370 1054 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 KRT82Q9NSB4 513 aa11.27□□□□□ -0.61
COL12A1-203ENST00000416123 C19orf81C9J6K1 198 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 RASA1P20936 1047 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 NFKBIAP25963 317 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 STYK1Q6J9G0 422 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 PGBD4Q96DM1 585 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 PRAMEP78395 509 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 DDX47Q9H0S4 455 aaKnown RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 EPC1Q9H2F5 836 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 SYNDIG1Q9H7V2 258 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 RPS6KA5O75582 802 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 APOEP02649 317 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 CDR2Q01850 454 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 FAM47EQ6ZV65 393 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 ZNF507Q8TCN5 953 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 BHMTQ93088 406 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 PBXIP1Q96AQ6 731 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 TRAIPQ9BWF2 469 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 DYRK4Q9NR20 520 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 F8W8V4 182 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 EEF1B2P24534 225 aaKnown RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 NT5C2P49902 561 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 COPS2P61201 443 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 NOP14P78316 857 aaKnown RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 TRIM28Q13263 835 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms