RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 CCDC25Q86WR0 208 aa19.34■□□□□ 0.69
SCARB1-203ENST00000415380 NUP85Q9BW27 656 aa19.34■□□□□ 0.69
SCARB1-203ENST00000415380 TDRD3Q9H7E2 651 aaKnown RBP19.34■□□□□ 0.69
SCARB1-203ENST00000415380 SLC12A4Q9UP95 1085 aa19.34■□□□□ 0.69
SCARB1-203ENST00000415380 PASKQ96RG2 1323 aa19.34■□□□□ 0.69
SCARB1-203ENST00000415380 IPO5O00410 1097 aaKnown RBP19.33■□□□□ 0.69
SCARB1-203ENST00000415380 GZMAP12544 262 aa19.33■□□□□ 0.69
SCARB1-203ENST00000415380 STRIP1Q5VSL9 837 aa19.33■□□□□ 0.69
SCARB1-203ENST00000415380 SLC47A2Q86VL8 602 aa19.33■□□□□ 0.69
SCARB1-203ENST00000415380 FAM71AQ8IYT1 594 aa19.33■□□□□ 0.69
SCARB1-203ENST00000415380 CXorf56Q9H5V9 222 aa19.33■□□□□ 0.69
SCARB1-203ENST00000415380 CYP26A1O43174 497 aa19.33■□□□□ 0.68
SCARB1-203ENST00000415380 ELF3P78545 371 aaPredicted RBP19.33■□□□□ 0.68
SCARB1-203ENST00000415380 CEP57Q86XR8 500 aa19.33■□□□□ 0.68
SCARB1-203ENST00000415380 MAGEC3Q8TD91 643 aa19.33■□□□□ 0.68
SCARB1-203ENST00000415380 KREMEN1Q96MU8 473 aa19.33■□□□□ 0.68
SCARB1-203ENST00000415380 RUNDC3BQ96NL0 473 aa19.33■□□□□ 0.68
SCARB1-203ENST00000415380 ACCSQ96QU6 501 aa19.33■□□□□ 0.68
SCARB1-203ENST00000415380 POP1Q99575 1024 aaKnown RBP19.33■□□□□ 0.68
SCARB1-203ENST00000415380 TMEM117Q9H0C3 514 aa19.33■□□□□ 0.68
SCARB1-203ENST00000415380 EHMT1Q9H9B1 1298 aa19.33■□□□□ 0.68
SCARB1-203ENST00000415380 HSPBP1Q9NZL4 362 aa19.33■□□□□ 0.68
SCARB1-203ENST00000415380 MCM8Q9UJA3 840 aa19.33■□□□□ 0.68
SCARB1-203ENST00000415380 CYP1A2P05177 515 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 ALDH1B1P30837 517 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 PDE4CQ08493 712 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 RASA3Q14644 834 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 MFSD5Q6N075 450 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 RNF207Q6ZRF8 634 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 TAOK1Q7L7X3 1001 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 EXOC3L1Q86VI1 746 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 TEX2Q8IWB9 1127 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 XXYLT1Q8NBI6 393 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 ACER1Q8TDN7 264 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 TMX4Q9H1E5 349 aaPredicted RBP19.32■□□□□ 0.68
SCARB1-203ENST00000415380 LARSQ9P2J5 1176 aaKnown RBP19.32■□□□□ 0.68
SCARB1-203ENST00000415380 ATRNL1Q5VV63 1379 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 GSTA1P08263 222 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 MXI1P50539 228 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 FMO1Q01740 532 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 PPP1R7Q15435 360 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 C12orf56Q8IXR9 622 aa19.32■□□□□ 0.68
SCARB1-203ENST00000415380 C12orf50Q8NA57 414 aaPredicted RBP19.32■□□□□ 0.68
SCARB1-203ENST00000415380 DDX23Q9BUQ8 820 aaKnown RBP19.32■□□□□ 0.68
SCARB1-203ENST00000415380 ECEL1O95672 775 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 MKRN4PQ13434 485 aaPredicted RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 NEDD9Q14511 834 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 ZNF568Q3ZCX4 644 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 HIBCHQ6NVY1 386 aaPredicted RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 MIGA2Q7L4E1 593 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 PPM1KQ8N3J5 372 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 TMEM174Q8WUU8 243 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 ZNF653Q96CK0 615 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 CSRNP1Q96S65 589 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 PKD2L1Q9P0L9 805 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 SERPINA10Q9UK55 444 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 DLATP10515 647 aaKnown RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 RWDD2BP57060 319 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 LLGL1Q15334 1064 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 LONRF1Q17RB8 773 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 TRPM8Q7Z2W7 1104 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 RPAINQ86UA6 219 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 ROPN1BQ9BZX4 212 aaPredicted RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 NSRP1Q9H0G5 558 aaKnown RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 RANBP17Q9H2T7 1088 aaKnown RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 CDC42EP4Q9H3Q1 356 aaKnown RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 LRRC19Q9H756 370 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 ROPN1Q9HAT0 212 aaPredicted RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 SYNPO2Q9UMS6 1093 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 SLX4Q8IY92 1834 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 MAPTP10636 758 aaKnown RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 IBSPP21815 317 aaPredicted RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 FKBP1AP62942 108 aaKnown RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 CALCOCO2Q13137 446 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 ALCAMQ13740 583 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 NSMFQ6X4W1 530 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 TRMT10CQ7L0Y3 403 aaKnown RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 TACO1Q9BSH4 297 aaKnown RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 ARHGEF10LQ9HCE6 1279 aa19.31■□□□□ 0.68
SCARB1-203ENST00000415380 MRPL11Q9Y3B7 192 aaKnown RBP19.31■□□□□ 0.68
SCARB1-203ENST00000415380 TP73O15350 636 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 CLDN3O15551 220 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 FAM133BQ5BKY9 247 aaKnown RBP19.3■□□□□ 0.68
SCARB1-203ENST00000415380 MIER3Q7Z3K6 550 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 RIT2Q99578 217 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 MXRA8Q9BRK3 442 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 AAASQ9NRG9 546 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 GTF3C4Q9UKN8 822 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 GOLGA8IPA6NC78 632 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 GOLGA8JA6NMD2 632 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 TULP1O00294 542 aaPredicted RBP19.3■□□□□ 0.68
SCARB1-203ENST00000415380 ECE2O60344 883 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 ENTPD3O75355 529 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 ATP6V1G2O95670 118 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 ADRB2P07550 413 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 PLS3P13797 630 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 MAP2K1Q02750 393 aaPredicted RBP19.3■□□□□ 0.68
SCARB1-203ENST00000415380 LRRC14Q15048 493 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 OTUD6AQ7L8S5 288 aa19.3■□□□□ 0.68
SCARB1-203ENST00000415380 CCDC63Q8NA47 563 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms