RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 KRT81Q14533 505 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 MFSD10Q14728 455 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 PRRT2Q7Z6L0 340 aaPredicted RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 KIAA0319LQ8IZA0 1049 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 PAIP2Q9BPZ3 127 aaKnown RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 KLHL11Q9NVR0 708 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 HDAC6Q9UBN7 1215 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 TELO2Q9Y4R8 837 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 M0QYV0 167 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 ZC3H11AO75152 810 aaKnown RBP eCLIP12.25□□□□□ -0.45
SNX13-202ENST00000409604 MOCS2O96007 188 aaPredicted RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 HLA-DRAP01903 254 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 ELF1P32519 619 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 ETF1P62495 437 aaKnown RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 KCTD19Q17RG1 926 aaPredicted RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 CELF3Q5SZQ8 465 aaKnown RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 C4orf19Q8IY42 314 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 UBA3Q8TBC4 463 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 ETNPPLQ8TBG4 499 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 CEP63Q96MT8 703 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 R3HDMLQ9H3Y0 253 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 UBIAD1Q9Y5Z9 338 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 ROBO3Q96MS0 1386 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 ANKRD63C9JTQ0 380 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 TGFB3P10600 412 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 ALCAMQ13740 583 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 FAM110CQ1W6H9 321 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 DNAJC24Q6P3W2 148 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 ERICH1Q86X53 443 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 SIX6OS1Q8N1H7 587 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 MICALL1Q8N3F8 863 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 UBL4BQ8N7F7 174 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 TNFRSF25Q93038 417 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 NUCKS1Q9H1E3 243 aaKnown RBP12.24□□□□□ -0.45
SNX13-202ENST00000409604 SAR1BQ9Y6B6 198 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 MAP1BP46821 2468 aaKnown RBP12.24□□□□□ -0.45
SNX13-202ENST00000409604 IGF2BP3O00425 579 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNX13-202ENST00000409604 SOCS7O14512 581 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 SLC4A1P02730 911 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 GNA15P30679 374 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 RAP1GAPP47736 663 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 INHBEP58166 350 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 CKAP4Q07065 602 aaKnown RBP12.24□□□□□ -0.45
SNX13-202ENST00000409604 TMEM132DQ14C87 1099 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 C8orf74Q6P047 294 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 ZNF365Q70YC5 407 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 ASAP3Q8TDY4 903 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 TAS1R2Q8TE23 839 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 LTBP3Q9NS15 1303 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 TOGARAM1Q9Y4F4 1720 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 TADA2AO75478 443 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 ITGA4P13612 1032 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 LCP1P13796 627 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 DYDC1Q8WWB3 177 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 AP1M1Q9BXS5 423 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 TSGA10Q9BZW7 698 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 RABEP2Q9H5N1 569 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 DNAJC17Q9NVM6 304 aaKnown RBP12.24□□□□□ -0.45
SNX13-202ENST00000409604 PCDHA13Q9Y5I0 950 aa12.24□□□□□ -0.45
SNX13-202ENST00000409604 E7EVH7 732 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 FTLP02792 175 aaPredicted RBP12.23□□□□□ -0.45
SNX13-202ENST00000409604 UCHL3P15374 230 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 CNOT8Q9UFF9 292 aaKnown RBP12.23□□□□□ -0.45
SNX13-202ENST00000409604 DDX41Q9UJV9 622 aaKnown RBP12.23□□□□□ -0.45
SNX13-202ENST00000409604 LRRD1A4D1F6 860 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 I3L4J1 428 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 RAG1P15918 1043 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 PSEN2P49810 448 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 ITKQ08881 620 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 PTGISQ16647 500 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 CASC4Q6P4E1 433 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 MOXD1Q6UVY6 613 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 CCDC51Q96ER9 411 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 PRDM10Q9NQV6 1147 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 RAB20Q9NX57 234 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 ANAPC7Q9UJX3 599 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 ATRNL1Q5VV63 1379 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 ARIH2O95376 493 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 RFC5P40937 340 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 CDH8P55286 799 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 FKBP1BP68106 108 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 SP2Q02086 613 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 HSPH1Q92598 858 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 LPPQ93052 612 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 SIK2Q9H0K1 926 aa12.23□□□□□ -0.45
SNX13-202ENST00000409604 KRIT1O00522 736 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 ZNF862O60290 1169 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 FKTNO75072 461 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 TTI2Q6NXR4 508 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 SAPCD2Q86UD0 394 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 SHCBP1Q8NEM2 672 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 VTA1Q9NP79 307 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 ERICH4A6NGS2 130 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 DCDC2CA8MYV0 355 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 TLR2O60603 784 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 HMBSP08397 361 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 STAG3L1P0CL83 205 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 KCNJ6P48051 423 aa12.22□□□□□ -0.45
SNX13-202ENST00000409604 MTM1Q13496 603 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms