RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 RWDD2AQ9UIY3 292 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 MCF2P10911 925 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 IBSPP21815 317 aaPredicted RBP36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 MAGEA10P43363 369 aaPredicted RBP36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 DCAF4L1Q3SXM0 396 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 OTOP2Q7RTS6 562 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 ZSWIM2Q8NEG5 633 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 TRAIPQ9BWF2 469 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 AGO2Q9UKV8 859 aaKnown RBP36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 PCDHB2Q9Y5E7 798 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 LOC101059915A0A1B0GWI6 518 aaPredicted RBP36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 FGBP02675 491 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 NR3C1P04150 777 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 CYP2J2P51589 502 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 LRRC63Q05C16 580 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 SEZ6Q53EL9 994 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 TTI2Q6NXR4 508 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 SLC24A5Q71RS6 500 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 THNSL1Q8IYQ7 743 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 CEP120Q8N960 986 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 BUD13Q9BRD0 619 aaKnown RBP eCLIP36.35■■■■□ 3.411e-7■■■□□ 19
CSNK1E-204ENST00000403904 HSPBP1Q9NZL4 362 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 HES2Q9Y543 173 aa36.35■■■■□ 3.41
CSNK1E-204ENST00000403904 A0A0U1RQF3 1178 aa36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 BICDL2A1A5D9 508 aa36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 C9IYK1 514 aa36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 H0YGN5 161 aa36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 ACTN1P12814 892 aa36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 ERCC5P28715 1186 aaPredicted RBP36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 TMEM240Q5SV17 173 aa36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 FAM43BQ6ZT52 329 aaPredicted RBP36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 APBB1IPQ7Z5R6 666 aaPredicted RBP36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 C12orf56Q8IXR9 622 aa36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 SAAL1Q96ER3 474 aa36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 EEF2KMTQ96G04 330 aa36.34■■■■□ 3.41
CSNK1E-204ENST00000403904 ABHD14A-ACY1A0A1B0GW23 586 aa36.33■■■■□ 3.41
CSNK1E-204ENST00000403904 OSTNP61366 133 aa36.33■■■■□ 3.41
CSNK1E-204ENST00000403904 EDRF1Q3B7T1 1238 aa36.33■■■■□ 3.41
CSNK1E-204ENST00000403904 CT47A1Q5JQC4 288 aaPredicted RBP36.33■■■■□ 3.41
CSNK1E-204ENST00000403904 LRSAM1Q6UWE0 723 aa36.33■■■■□ 3.41
CSNK1E-204ENST00000403904 SMG8Q8ND04 991 aaKnown RBP36.33■■■■□ 3.41
CSNK1E-204ENST00000403904 NXF3Q9H4D5 531 aaKnown RBP36.33■■■■□ 3.41
CSNK1E-204ENST00000403904 C1orf112Q9NSG2 853 aa36.33■■■■□ 3.41
CSNK1E-204ENST00000403904 IPPQ9Y573 584 aa36.33■■■■□ 3.41
CSNK1E-204ENST00000403904 NR2F2P24468 414 aa36.32■■■■□ 3.41
CSNK1E-204ENST00000403904 ZBTB41Q5SVQ8 909 aa36.32■■■■□ 3.41
CSNK1E-204ENST00000403904 PSRC1Q6PGN9 363 aaPredicted RBP36.32■■■■□ 3.41
CSNK1E-204ENST00000403904 LIN28BQ6ZN17 250 aaKnown RBP eCLIP36.32■■■■□ 3.41
CSNK1E-204ENST00000403904 NOC3LQ8WTT2 800 aaKnown RBP36.32■■■■□ 3.41
CSNK1E-204ENST00000403904 DUSP9Q99956 384 aaKnown RBP36.32■■■■□ 3.41
CSNK1E-204ENST00000403904 GOLGA8IPA6NC78 632 aa36.32■■■■□ 3.4
CSNK1E-204ENST00000403904 GOLGA8JA6NMD2 632 aa36.32■■■■□ 3.4
CSNK1E-204ENST00000403904 OGTO15294 1046 aa36.32■■■■□ 3.4
CSNK1E-204ENST00000403904 FAM189A1O60320 539 aa36.32■■■■□ 3.4
CSNK1E-204ENST00000403904 DMAC2Q9NW81 257 aa36.32■■■■□ 3.4
CSNK1E-204ENST00000403904 ACOT2P49753 483 aa36.31■■■■□ 3.4
CSNK1E-204ENST00000403904 RAB27AP51159 221 aa36.31■■■■□ 3.4
CSNK1E-204ENST00000403904 ZNF445P59923 1031 aa36.31■■■■□ 3.4
CSNK1E-204ENST00000403904 ADAM9Q13443 819 aa36.31■■■■□ 3.4
CSNK1E-204ENST00000403904 NFIL3Q16649 462 aa36.31■■■■□ 3.4
CSNK1E-204ENST00000403904 ECHDC2Q86YB7 292 aa36.31■■■■□ 3.4
CSNK1E-204ENST00000403904 SLC9A9Q8IVB4 645 aa36.31■■■■□ 3.4
CSNK1E-204ENST00000403904 TMEM192Q8IY95 271 aa36.31■■■■□ 3.4
CSNK1E-204ENST00000403904 APOL6Q9BWW8 343 aa36.31■■■■□ 3.4
CSNK1E-204ENST00000403904 PDE4DIPQ5VU43 2346 aa36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 ZNF623O75123 536 aa36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 BAIAP3O94812 1187 aa36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 FAM189BP81408 668 aa36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 XXYLT1Q8NBI6 393 aa36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 RNF169Q8NCN4 708 aa36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 FAM213AQ9BRX8 229 aa36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 NAT10Q9H0A0 1025 aaKnown RBP36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 RNF39Q9H2S5 420 aa36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 SNTG2Q9NY99 539 aa36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 TTC3P53804 2025 aa36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 LAMA2P24043 3122 aaKnown RBP36.3■■■■□ 3.4
CSNK1E-204ENST00000403904 SKIP12755 728 aa36.29■■■■□ 3.4
CSNK1E-204ENST00000403904 RPL13P26373 211 aaKnown RBP36.29■■■■□ 3.4
CSNK1E-204ENST00000403904 TNFSF9P41273 254 aa36.29■■■■□ 3.4
CSNK1E-204ENST00000403904 GPD1LQ8N335 351 aa36.29■■■■□ 3.4
CSNK1E-204ENST00000403904 TMEM174Q8WUU8 243 aa36.29■■■■□ 3.4
CSNK1E-204ENST00000403904 EXOC3O60645 756 aa36.28■■■■□ 3.4
CSNK1E-204ENST00000403904 EFCAB14O75071 495 aa36.28■■■■□ 3.4
CSNK1E-204ENST00000403904 STAG3L1P0CL83 205 aa36.28■■■■□ 3.4
CSNK1E-204ENST00000403904 ATF7P17544 494 aaPredicted RBP36.28■■■■□ 3.4
CSNK1E-204ENST00000403904 WDR5P61964 334 aaKnown RBP36.28■■■■□ 3.4
CSNK1E-204ENST00000403904 FKBP3Q00688 224 aaKnown RBP36.28■■■■□ 3.4
CSNK1E-204ENST00000403904 FOXR2Q6PJQ5 311 aa36.28■■■■□ 3.4
CSNK1E-204ENST00000403904 CSGALNACT2Q8N6G5 542 aa36.28■■■■□ 3.4
CSNK1E-204ENST00000403904 RDH13Q8NBN7 331 aa36.28■■■■□ 3.4
CSNK1E-204ENST00000403904 LPPQ93052 612 aa36.28■■■■□ 3.4
CSNK1E-204ENST00000403904 MEIS3P2A8K0S8 358 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 ZBBXA8MT70 800 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 KIAA0391O15091 583 aaKnown RBP36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 EXTL3O43909 919 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 LDHAP00338 332 aaKnown RBP36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 AKAP5P24588 427 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 GRM5P41594 1212 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 CASP4P49662 377 aa36.27■■■■□ 3.4
CSNK1E-204ENST00000403904 MLLT1Q03111 559 aaPredicted RBP36.27■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms