RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 GUCY2DQ02846 1103 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 CYP24A1Q07973 514 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 CBWD2Q8IUF1 395 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 RPUSD2Q8IZ73 545 aaKnown RBP11.59□□□□□ -0.55
LINC00649-202ENST00000400353 FBXL13Q8NEE6 735 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 CCDC26Q8TAB7 109 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 POMGNT1Q8WZA1 660 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 SHC3Q92529 594 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 EPB41L5Q9HCM4 733 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 RNF181Q9P0P0 153 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 ARHGAP28Q9P2N2 729 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 PPME1Q9Y570 386 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 SSC5DA1L4H1 1573 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 GOLGA8IPA6NC78 632 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 GOLGA8JA6NMD2 632 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 BUB1BO60566 1050 aaPredicted RBP11.59□□□□□ -0.55
LINC00649-202ENST00000400353 MTA2O94776 668 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 GLI1P08151 1106 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 MAATS1Q7Z4T9 603 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 BSNDQ8WZ55 320 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 ITFG2Q969R8 447 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 SH2D3AQ9BRG2 576 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 POLR3FQ9H1D9 316 aaPredicted RBP11.59□□□□□ -0.55
LINC00649-202ENST00000400353 CARD9Q9H257 536 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 DONSONQ9NYP3 566 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 WDR90Q96KV7 1748 aa11.59□□□□□ -0.55
LINC00649-202ENST00000400353 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 KRIT1O00522 736 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 DDX3YO15523 660 aaKnown RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 RAD51CO43502 376 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 KIF1CO43896 1103 aaKnown RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 HSPA6P17066 643 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 ABCB4P21439 1286 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 GGCXP38435 758 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 STRN3Q13033 797 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 PPFIA1Q13136 1202 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 RIOX2Q8IUF8 465 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 CCDC60Q8IWA6 550 aaPredicted RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 KLHL7Q8IXQ5 586 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 EXOC8Q8IYI6 725 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 UBL4BQ8N7F7 174 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 DHX38Q92620 1227 aaKnown RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 BICD1Q96G01 975 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 RPS6KC1Q96S38 1066 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 SH3GL2Q99962 352 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 THAP2Q9H0W7 228 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 TAF1DQ9H5J8 278 aaPredicted RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 XPNPEP1Q9NQW7 623 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 ZNF302Q9NR11 478 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 RAB20Q9NX57 234 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 CALCOCO1Q9P1Z2 691 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 GOLGA6L10A0A0M3HER8 536 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 ZNF233A6NK53 670 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 HNRNPDLO14979 420 aaKnown RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 EXTL3O43909 919 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 USP2O75604 605 aaPredicted RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 PIGRP01833 764 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 FTLP02792 175 aaPredicted RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 OATP04181 439 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 RFC5P40937 340 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 LMAN1P49257 510 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 POLGP54098 1239 aaPredicted RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 EMC2Q15006 297 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 SLFN12LQ6IEE8 588 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 LBX2Q6XYB7 198 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 LEKR1Q6ZMV7 388 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 PPM1KQ8N3J5 372 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 ZNF513Q8N8E2 541 aaPredicted RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 CASKIN2Q8WXE0 1202 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 ARHGEF26Q96DR7 871 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 SAAL1Q96ER3 474 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 MPHOSPH6Q99547 160 aaKnown RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 NIFKQ9BYG3 293 aaKnown RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 FAM204AQ9H8W3 233 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 OSGEPQ9NPF4 335 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 CTTNBP2NLQ9P2B4 639 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 NOCTQ9UK39 431 aaKnown RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 MAFBQ9Y5Q3 323 aaPredicted RBP11.58□□□□□ -0.56
LINC00649-202ENST00000400353 STYXL1Q9Y6J8 313 aa11.58□□□□□ -0.56
LINC00649-202ENST00000400353 A0A0G2JMZ2 1700 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 A6NNZ2 444 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 AGPSO00116 658 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 GGPS1O95749 300 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 LDHAP00338 332 aaKnown RBP11.57□□□□□ -0.56
LINC00649-202ENST00000400353 COPB2P35606 906 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 USP8P40818 1118 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 NAMPTP43490 491 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 CARSP49589 748 aaKnown RBP11.57□□□□□ -0.56
LINC00649-202ENST00000400353 LIG4P49917 911 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 PDE6CP51160 858 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 ALDH5A1P51649 535 aaPredicted RBP11.57□□□□□ -0.56
LINC00649-202ENST00000400353 GCNT1Q02742 428 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 PSMD6Q15008 389 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 SETDB1Q15047 1291 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 TUBB8Q3ZCM7 444 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 MTERF2Q49AM1 385 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 PRAMEF18Q5VWM3 479 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 C9orf131Q5VYM1 1079 aa11.57□□□□□ -0.56
LINC00649-202ENST00000400353 FAM160B1Q5W0V3 765 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms