RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 KITP10721 976 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 VCAM1P19320 739 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 HDLBPQ00341 1268 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 SNX17Q15036 470 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 GRAMD1CQ8IYS0 662 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 ARMC2Q8NEN0 867 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 ANKRD7Q92527 254 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 UBE4BO95155 1302 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 SPDYE5A6NIY4 337 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 STAT3P40763 770 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 LRRC63Q05C16 580 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 MTMR2Q13614 643 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 ZNF235Q14590 738 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 KLHL38Q2WGJ6 581 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 SPDYE7PQ495Y7 208 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 SKA1Q96BD8 255 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 PCDHA5Q9Y5H7 936 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 PODXLO00592 558 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 RNASEH1O60930 286 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 SRGAP2O75044 1071 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 ACSL3O95573 720 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 KRT72Q14CN4 511 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 ANKS6Q68DC2 871 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 ALKBH2Q6NS38 261 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 APOA5Q6Q788 366 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 RGS9BPQ6ZS82 235 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 FBXO18Q8NFZ0 1043 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 LSG1Q9H089 658 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 KIAA1586Q9HCI6 787 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 DNAJC17Q9NVM6 304 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 RRP15Q9Y3B9 282 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 SH2B2O14492 632 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 KRT8P05787 483 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 CALB1P05937 261 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 BHMTQ93088 406 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 TMEM169Q96HH4 297 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 SH3GLB2Q9NR46 395 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 WARS2Q9UGM6 360 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 A0A0G2JND7 137 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 CCDC195A0A1B0GUA6 201 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 PQBP1O60828 265 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 NR1D1P20393 614 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 GRIN1Q05586 938 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 LCORLQ8N3X6 602 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 PAGE5Q96GU1 130 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 TRIM54Q9BYV2 358 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 MCM8Q9UJA3 840 aa11.7□□□□□ -0.54
CACNA1C-215ENST00000399637 ZBED6P86452 979 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 SLC7A5Q01650 507 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 SWSAP1Q6NVH7 229 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 AHCYL2Q96HN2 611 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 KRT38O76015 456 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 PRELPP51888 382 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 AP1B1Q10567 949 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 VPS11Q9H270 941 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 SMYD3Q9H7B4 428 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 UBE2Q2LH0YL09 131 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 CCNE1P24864 410 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 TBC1D9BQ66K14 1250 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 HIPK4Q8NE63 616 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 DMAP1Q9NPF5 467 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 E9PCH4 1651 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 ZW10O43264 779 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 NDUFS2O75306 463 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 SLFN14P0C7P3 912 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 LTKP29376 864 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 CPT1AP50416 773 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 GTF2A2P52657 109 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 MB21D1Q8N884 522 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 LZTS1Q9Y250 596 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 M0QYV0 167 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 HSPA1AP0DMV8 641 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 HSPA1BP0DMV9 641 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 RGS2P41220 211 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 PCYT1AP49585 367 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 HDAC4P56524 1084 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 MORF4L2Q15014 288 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 GLB1LQ6UWU2 654 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 RRM2BQ7LG56 351 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 GFM2Q969S9 779 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 FOPNLQ96NB1 174 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 USP44Q9H0E7 712 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 EML4Q9HC35 981 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 ZFP69BQ9UJL9 534 aa11.69□□□□□ -0.54
CACNA1C-215ENST00000399637 LRRC53A6NM62 1247 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 THPOP40225 353 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 CDK8P49336 464 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 TFDP2Q14188 446 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 ITPRIPL1Q6GPH6 555 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 PITPNM3Q9BZ71 974 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 GBA2Q9HCG7 927 aaPredicted RBP11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 ZNRF3Q9ULT6 936 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 PCDHB12Q9Y5F1 795 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 IGSF1Q8N6C5 1336 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 AATKQ6ZMQ8 1374 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 GYG2O15488 501 aa11.68□□□□□ -0.54
CACNA1C-215ENST00000399637 LCP1P13796 627 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms