RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 FBXO28Q9NVF7 368 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.52■■■□□ 2
COL13A1-203ENST00000398969 PCDHA3Q9Y5H8 950 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 PODXLO00592 558 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 ERMARDQ5T6L9 678 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 SEL1L2Q5TEA6 688 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 FAM160B2Q86V87 743 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 CD101Q93033 1021 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 XPO6Q96QU8 1125 aaKnown RBP27.51■■□□□ 1.99
COL13A1-203ENST00000398969 SGIP1Q9BQI5 828 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 WNT8AQ9H1J5 351 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 GBP1P32455 592 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 RARRES1P49788 294 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 TNIP1Q15025 636 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 CCDC137Q6PK04 289 aaKnown RBP27.51■■□□□ 1.99
COL13A1-203ENST00000398969 FAM71AQ8IYT1 594 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 CACNA2D3Q8IZS8 1091 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 MORC4Q8TE76 937 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 CEP89Q96ST8 783 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 OSBPL7Q9BZF2 842 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 TMEM117Q9H0C3 514 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 DEFB129Q9H1M3 183 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 DBR1Q9UK59 544 aaKnown RBP27.51■■□□□ 1.99
COL13A1-203ENST00000398969 CD2APQ9Y5K6 639 aa27.51■■□□□ 1.99
COL13A1-203ENST00000398969 CCDC169A6NNP5 214 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 PHF20L1A8MW92 1017 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 ATMINO43313 823 aaPredicted RBP27.5■■□□□ 1.99
COL13A1-203ENST00000398969 GZMAP12544 262 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 ALAS1P13196 640 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 DRD4P21917 467 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 MXI1P50539 228 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 SLC29A2Q14542 456 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 FAM129AQ9BZQ8 928 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 PGAP2Q9UHJ9 254 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 TRPC6Q9Y210 931 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 MAPK13O15264 365 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 DHX15O43143 795 aaKnown RBP27.5■■□□□ 1.99
COL13A1-203ENST00000398969 PYGMP11217 842 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 HSD17B4P51659 736 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 MIGA2Q7L4E1 593 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 ACTR5Q9H9F9 607 aaPredicted RBP27.5■■□□□ 1.99
COL13A1-203ENST00000398969 PARP2Q9UGN5 583 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 USP20Q9Y2K6 914 aa27.5■■□□□ 1.99
COL13A1-203ENST00000398969 GKAP1Q5VSY0 366 aaPredicted RBP27.49■■□□□ 1.99
COL13A1-203ENST00000398969 HAUS6Q7Z4H7 955 aa27.49■■□□□ 1.99
COL13A1-203ENST00000398969 CPLX4Q7Z7G2 160 aa27.49■■□□□ 1.99
COL13A1-203ENST00000398969 KREMEN1Q96MU8 473 aa27.49■■□□□ 1.99
COL13A1-203ENST00000398969 COL20A1Q9P218 1284 aa27.49■■□□□ 1.99
COL13A1-203ENST00000398969 PMM2O15305 246 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 GTF2BQ00403 316 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 CYP1B1Q16678 543 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 SWT1Q5T5J6 900 aaKnown RBP27.48■■□□□ 1.99
COL13A1-203ENST00000398969 IL31RAQ8NI17 732 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 CHMP6Q96FZ7 201 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 SEMA4AQ9H3S1 761 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 ACP6Q9NPH0 428 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 MTRF1LQ9UGC7 380 aaKnown RBP27.48■■□□□ 1.99
COL13A1-203ENST00000398969 CNOT7Q9UIV1 285 aaKnown RBP27.48■■□□□ 1.99
COL13A1-203ENST00000398969 FEM1BQ9UK73 627 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 TCRBV7S2A1N4TA0A589 114 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 CYP26A1O43174 497 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 MMP13P45452 471 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 SMTNP53814 917 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 RASA3Q14644 834 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 SPRED3Q2MJR0 410 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 UBAP2Q5T6F2 1119 aaKnown RBP27.48■■□□□ 1.99
COL13A1-203ENST00000398969 SLC47A2Q86VL8 602 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 AZI2Q9H6S1 392 aa27.48■■□□□ 1.99
COL13A1-203ENST00000398969 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.48■■□□□ 1.99
COL13A1-203ENST00000398969 GOLGA6L7A0A1B0GV03 622 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 TLDC2A0PJX2 215 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 ADRB2P07550 413 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 CHN1P15882 459 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 CPNE8Q86YQ8 564 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 SLC13A5Q86YT5 568 aaPredicted RBP27.47■■□□□ 1.99
COL13A1-203ENST00000398969 AGBL1Q96MI9 1066 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 ADAM7Q9H2U9 754 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 ST6GALNAC4Q9H4F1 302 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 CTNND1O60716 968 aaKnown RBP27.47■■□□□ 1.99
COL13A1-203ENST00000398969 MNAT1P51948 309 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 PPM1KQ8N3J5 372 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 ZNF564Q8TBZ8 553 aaPredicted RBP27.47■■□□□ 1.99
COL13A1-203ENST00000398969 NUP85Q9BW27 656 aa27.47■■□□□ 1.99
COL13A1-203ENST00000398969 CYP1A2P05177 515 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 MMEP08473 750 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 COILP38432 576 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-203ENST00000398969 QARSP47897 775 aaKnown RBP27.46■■□□□ 1.99
COL13A1-203ENST00000398969 ZNF280AP59817 542 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-203ENST00000398969 FMO1Q01740 532 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 ANKRD20A8PQ5CZ79 823 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 SHC3Q92529 594 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 BTBD6Q96KE9 485 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 SH2D3AQ9BRG2 576 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 GOLGA8IPA6NC78 632 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 GOLGA8JA6NMD2 632 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 DNM1LO00429 736 aa27.46■■□□□ 1.99
COL13A1-203ENST00000398969 RGS16O15492 202 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-203ENST00000398969 SNRPFP62306 86 aaKnown RBP27.46■■□□□ 1.99
COL13A1-203ENST00000398969 MAP2K1Q02750 393 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-203ENST00000398969 MAP3K10Q02779 954 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms