RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 BTNL9Q6UXG8 535 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 CYFIP1Q7L576 1253 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 YTHDF3Q7Z739 585 aaKnown RBP11.75□□□□□ -0.53
HPS4-202ENST00000398145 DUSP9Q99956 384 aaKnown RBP11.75□□□□□ -0.53
HPS4-202ENST00000398145 KLC2Q9H0B6 622 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 TSPYL2Q9H2G4 693 aaPredicted RBP11.75□□□□□ -0.53
HPS4-202ENST00000398145 NPHS2Q9NP85 383 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 G3BP2Q9UN86 482 aaKnown RBP11.75□□□□□ -0.53
HPS4-202ENST00000398145 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.75□□□□□ -0.53
HPS4-202ENST00000398145 ADAMTS13Q76LX8 1427 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 MROH2AA6NES4 1674 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 CALB1P05937 261 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 RASA1P20936 1047 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 DEPDC1BQ8WUY9 529 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 ANKRD36BP1Q96IX9 119 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 COA1Q9GZY4 146 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 IP6K2Q9UHH9 426 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 TLK1Q9UKI8 766 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 MROH1Q8NDA8 1641 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 F5H6K3 240 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 PPEF1O14829 653 aaPredicted RBP11.75□□□□□ -0.53
HPS4-202ENST00000398145 SERPINB2P05120 415 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 GSTA2P09210 222 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 KLRC3Q07444 240 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 ZNF394Q53GI3 561 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 SLFN12LQ6IEE8 588 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 TRIM72Q6ZMU5 477 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 RFX8Q6ZV50 586 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 FAM160B2Q86V87 743 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 NUDCD3Q8IVD9 361 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 CEP70Q8NHQ1 597 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 LXNQ9BS40 222 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 WWP1Q9H0M0 922 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 MID2Q9UJV3 735 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 TBX3O15119 743 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 TTC4O95801 387 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 GH2P01242 217 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 MYCNP04198 464 aaPredicted RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 P4HBP07237 508 aaKnown RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 KITP10721 976 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 COILP38432 576 aaPredicted RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 RABGAP1LQ5R372 815 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 RGS9BPQ6ZS82 235 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 HAUS6Q7Z4H7 955 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 FUKQ8N0W3 1084 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 DNAAF3Q8N9W5 541 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 CDHR1Q96JP9 859 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 DRC3Q9H069 523 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 ALG13Q9NP73 1137 aaKnown RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 UBN1Q9NPG3 1134 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 F8VZ95 297 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 CAPN9O14815 690 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 MYBL2P10244 700 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 EIF2AK2P19525 551 aaKnown RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 MX2P20592 715 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 FNTAP49354 379 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 AMPD2Q01433 879 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 ZNF844Q08AG5 666 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 DNAJC3Q13217 504 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 MTERF2Q49AM1 385 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 FSCBQ5H9T9 825 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 ANO5Q75V66 913 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 CCNYQ8ND76 341 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 EPS8L3Q8TE67 593 aaKnown RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 ALKBH8Q96BT7 664 aaKnown RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 LBHD1Q9BQE6 289 aaPredicted RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 DIP2CQ9Y2E4 1556 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 DENND3A2RUS2 1198 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 UBOX5O94941 541 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 LDHAP00338 332 aaKnown RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 KCNA3P22001 575 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 RPA1P27694 616 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 QARSP47897 775 aaKnown RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 SATB1Q01826 763 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 P3H1Q32P28 736 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 RASSF3Q86WH2 238 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 SLC13A5Q86YT5 568 aaPredicted RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 RIBC1Q8N443 379 aaPredicted RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 MCPH1Q8NEM0 835 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 SLC30A5Q8TAD4 765 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 SLC26A7Q8TE54 656 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 ADPGKQ9BRR6 497 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 FAM213AQ9BRX8 229 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 TRIM56Q9BRZ2 755 aaKnown RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 PPCSQ9HAB8 311 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 TUFT1Q9NNX1 390 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 GDF3Q9NR23 364 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 DLGAP2Q9P1A6 1054 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 NEU2Q9Y3R4 380 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 GOLGA8RI6L899 631 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 PJA2O43164 708 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 KRT7P08729 469 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 PON1P27169 355 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 NPEPPSP55786 919 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 NOP14P78316 857 aaKnown RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 CUL3Q13618 768 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 TTMPQ5BVD1 217 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms