RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 RTN2O75298 545 aa17.87■□□□□ 0.45
TRIM39-205ENST00000396551 CLSTN1O94985 981 aa17.87■□□□□ 0.45
TRIM39-205ENST00000396551 GPC3P51654 580 aa17.87■□□□□ 0.45
TRIM39-205ENST00000396551 POU5F1Q01860 360 aaKnown RBP17.87■□□□□ 0.45
TRIM39-205ENST00000396551 SP2Q02086 613 aa17.87■□□□□ 0.45
TRIM39-205ENST00000396551 CYP24A1Q07973 514 aa17.87■□□□□ 0.45
TRIM39-205ENST00000396551 LRRC31Q6UY01 552 aa17.87■□□□□ 0.45
TRIM39-205ENST00000396551 TMC2Q8TDI7 906 aa17.87■□□□□ 0.45
TRIM39-205ENST00000396551 POMGNT1Q8WZA1 660 aa17.87■□□□□ 0.45
TRIM39-205ENST00000396551 FAM84AQ96KN4 292 aa17.87■□□□□ 0.45
TRIM39-205ENST00000396551 CYP26B1Q9NR63 512 aa17.87■□□□□ 0.45
TRIM39-205ENST00000396551 SPATA31C2B4DYI2 1134 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 ALG6Q9Y672 507 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 ZNF233A6NK53 670 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 DGAT1O75907 488 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 MMEP08473 750 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 FMO1Q01740 532 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 PRPF4BQ13523 1007 aaKnown RBP17.86■□□□□ 0.45
TRIM39-205ENST00000396551 CFAP58Q5T655 872 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 NAA35Q5VZE5 725 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 LEKR1Q6ZMV7 388 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 EIF1ADQ8N9N8 165 aaKnown RBP17.86■□□□□ 0.45
TRIM39-205ENST00000396551 RNPC3Q96LT9 517 aaKnown RBP17.86■□□□□ 0.45
TRIM39-205ENST00000396551 CELF4Q9BZC1 486 aaKnown RBP17.86■□□□□ 0.45
TRIM39-205ENST00000396551 CARD9Q9H257 536 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 SLITRK6Q9H5Y7 841 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 GGA3Q9NZ52 723 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 CTTNBP2NLQ9P2B4 639 aa17.86■□□□□ 0.45
TRIM39-205ENST00000396551 TTI1O43156 1089 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 KRT14P02533 472 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 HSPA9P38646 679 aaKnown RBP17.85■□□□□ 0.45
TRIM39-205ENST00000396551 MFAP3P55082 362 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 GPC5P78333 572 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 FSTL1Q12841 308 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 ZNF211Q13398 564 aaPredicted RBP17.85■□□□□ 0.45
TRIM39-205ENST00000396551 ZNF526Q8TF50 670 aaPredicted RBP17.85■□□□□ 0.45
TRIM39-205ENST00000396551 RUFY1Q96T51 708 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 AFG3L2Q9Y4W6 797 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 ATMINO43313 823 aaPredicted RBP17.85■□□□□ 0.45
TRIM39-205ENST00000396551 DKC1O60832 514 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRIM39-205ENST00000396551 PPFIA1Q13136 1202 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 CUL1Q13616 776 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 HLTFQ14527 1009 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRIM39-205ENST00000396551 C11orf63Q6NUN7 778 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 FOXR1Q6PIV2 292 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 MCPH1Q8NEM0 835 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 TATDN2Q93075 761 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 POLR3FQ9H1D9 316 aaPredicted RBP17.85■□□□□ 0.45
TRIM39-205ENST00000396551 TMOD4Q9NZQ9 345 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 ARHGAP28Q9P2N2 729 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 DIS3Q9Y2L1 958 aaKnown RBP17.85■□□□□ 0.45
TRIM39-205ENST00000396551 ATP4AP20648 1035 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 RTP1P59025 263 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 AADACL2Q6P093 401 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 SV2AQ7L0J3 742 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 GPD1LQ8N335 351 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 FBXL13Q8NEE6 735 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 DHX38Q92620 1227 aaKnown RBP17.85■□□□□ 0.45
TRIM39-205ENST00000396551 ATP6V0A4Q9HBG4 840 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 ERVK-5Q9HDB9 667 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 RAB20Q9NX57 234 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 PTPRFP10586 1907 aa17.85■□□□□ 0.45
TRIM39-205ENST00000396551 SIP14410 1827 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 HNRNPDLO14979 420 aaKnown RBP17.84■□□□□ 0.45
TRIM39-205ENST00000396551 PEX10O60683 326 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 SHOX2O60902 331 aaPredicted RBP17.84■□□□□ 0.45
TRIM39-205ENST00000396551 MARCKSL1P49006 195 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 HIRAP54198 1017 aaPredicted RBP17.84■□□□□ 0.45
TRIM39-205ENST00000396551 MTERF2Q49AM1 385 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRIM39-205ENST00000396551 KRT35Q92764 455 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 CDHR1Q96JP9 859 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 SUPT20HL2P0C7V6 817 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 GZMAP12544 262 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 COPB2P35606 906 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 PRKG1Q13976 671 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 SUPT20HL1Q3ZLR7 823 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 NT5C1BQ96P26 610 aa17.84■□□□□ 0.45
TRIM39-205ENST00000396551 DAPK3O43293 454 aa17.83■□□□□ 0.45
TRIM39-205ENST00000396551 DLATP10515 647 aaKnown RBP17.83■□□□□ 0.45
TRIM39-205ENST00000396551 CYP11B1P15538 503 aa17.83■□□□□ 0.45
TRIM39-205ENST00000396551 NOL9Q5SY16 702 aaKnown RBP17.83■□□□□ 0.45
TRIM39-205ENST00000396551 SEC14L1Q92503 715 aa17.83■□□□□ 0.45
TRIM39-205ENST00000396551 TMEM110-MUSTN1A8MSY1 372 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 STAM2O75886 525 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 GARTP22102 1010 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 GTF2H1P32780 548 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 FLT3P36888 993 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 BRDTQ58F21 947 aaPredicted RBP17.83■□□□□ 0.44
TRIM39-205ENST00000396551 MIS18BP1Q6P0N0 1132 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 ADAT2Q7Z6V5 191 aaKnown RBP17.83■□□□□ 0.44
TRIM39-205ENST00000396551 CPNE8Q86YQ8 564 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 CD302Q8IX05 232 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 DDX1Q92499 740 aaKnown RBP17.83■□□□□ 0.44
TRIM39-205ENST00000396551 ZNF516Q92618 1163 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 FAM213AQ9BRX8 229 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 PI4K2AQ9BTU6 479 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 MTA2O94776 668 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 PTENP60484 403 aa17.83■□□□□ 0.44
TRIM39-205ENST00000396551 CNTN2Q02246 1040 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms