RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CDK17Q00537 523 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 PSMD6Q15008 389 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 LHX8Q68G74 356 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 PRMT7Q9NVM4 692 aaPredicted RBP13.84□□□□□ -0.19
TRIM39-204ENST00000396548 AJAP1Q9UKB5 411 aaPredicted RBP13.84□□□□□ -0.19
TRIM39-204ENST00000396548 TNFSF13BQ9Y275 285 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 ARHGAP6O43182 974 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 MSNP26038 577 aaKnown RBP13.83□□□□□ -0.19
TRIM39-204ENST00000396548 GTF2H1P32780 548 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 EXOC3L4Q17RC7 722 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 TCERG1LQ5VWI1 586 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 RAD9BQ6WBX8 426 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 GBP6Q6ZN66 633 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 RAET1EQ8TD07 263 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 ZNF516Q92618 1163 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 PRIMPOLQ96LW4 560 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 TMEM117Q9H0C3 514 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 CDHR5Q9HBB8 845 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 PLAGL2Q9UPG8 496 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 COQ4Q9Y3A0 265 aa13.83□□□□□ -0.19
TRIM39-204ENST00000396548 C17orf102A2RUQ5 167 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 KRT13P13646 458 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 KCNA10Q16322 511 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 TRIM65Q6PJ69 517 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 CXCL17Q6UXB2 119 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 SRGAP1Q7Z6B7 1085 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 NEK11Q8NG66 645 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 GTF2IRD1Q9UHL9 959 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 LDHAP00338 332 aaKnown RBP13.83□□□□□ -0.2
TRIM39-204ENST00000396548 TPM1P09493 284 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 JAM2P57087 298 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 PRPF4BQ13523 1007 aaKnown RBP13.83□□□□□ -0.2
TRIM39-204ENST00000396548 NBPF20Q3BBV1 942 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 PDXDC1Q6P996 788 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 POP1Q99575 1024 aaKnown RBP13.83□□□□□ -0.2
TRIM39-204ENST00000396548 MSTO1Q9BUK6 570 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 GCNT4Q9P109 453 aa13.83□□□□□ -0.2
TRIM39-204ENST00000396548 CPSF3Q9UKF6 684 aaKnown RBP13.83□□□□□ -0.2
TRIM39-204ENST00000396548 PTPRJQ12913 1337 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 SOWAHDA6NJG2 315 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 ZNF233A6NK53 670 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 MEFVO15553 781 aaPredicted RBP13.82□□□□□ -0.2
TRIM39-204ENST00000396548 INHAP05111 366 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 ASGR1P07306 291 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 CYP2C9P11712 490 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 CDC42EP1Q00587 391 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 MTF1Q14872 753 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 ATF7IP2Q5U623 682 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 EEF1DP3Q658K8 133 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 MPZL3Q6UWV2 235 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 SYN2Q92777 582 aaPredicted RBP13.82□□□□□ -0.2
TRIM39-204ENST00000396548 MAP7D2Q96T17 732 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 PDZD7Q9H5P4 517 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 RALGAPA2Q2PPJ7 1873 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 USP27XA6NNY8 438 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 CLDN3O15551 220 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 ZEB2O60315 1214 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 TSPAN1O60635 241 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 UCHL3P15374 230 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 ACOT2P49753 483 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 NOLC1Q14978 699 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRIM39-204ENST00000396548 EHBP1Q8NDI1 1231 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 CHP1Q99653 195 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 GPR88Q9GZN0 384 aa13.82□□□□□ -0.2
TRIM39-204ENST00000396548 LRRC53A6NM62 1247 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 INO80B-WBP1J3KQ70 363 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 CSDE1O75534 798 aaKnown RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 TNFSF9P41273 254 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 MYL7Q01449 175 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 GDF6Q6KF10 455 aaPredicted RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 TOGARAM2Q6ZUX3 1019 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 CCAR2Q8N163 923 aaKnown RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 C7orf31Q8N865 590 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 PCMTD1Q96MG8 357 aaPredicted RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 INO80BQ9C086 356 aaPredicted RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 INTS2Q9H0H0 1204 aaKnown RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 SPC25Q9HBM1 224 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 ANKFY1Q9P2R3 1169 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 PTCH2Q9Y6C5 1203 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 CEP350Q5VT06 3117 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 N4BP1O75113 896 aaKnown RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 LRRN2O75325 713 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 GCLMP48507 274 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 MAP2K1Q02750 393 aaPredicted RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 HGSNATQ68CP4 663 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 TMTC1Q8IUR5 882 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 NME8Q8N427 588 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 DNAJB3Q8WWF6 145 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 NLRP7Q8WX94 980 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 TMEM8AQ9HCN3 771 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 TOPORSQ9NS56 1045 aaPredicted RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 OGTO15294 1046 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 ARF4P18085 180 aaPredicted RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 HOXA11P31270 313 aaPredicted RBP13.81□□□□□ -0.2
TRIM39-204ENST00000396548 KIZQ2M2Z5 673 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 CYP26C1Q6V0L0 522 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 RPAINQ86UA6 219 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms