RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 TRPV1Q8NER1 839 aa12.91□□□□□ -0.34
GTF2A2-202ENST00000396060 PRIMPOLQ96LW4 560 aa12.91□□□□□ -0.34
GTF2A2-202ENST00000396060 CCDC42Q96M95 316 aa12.91□□□□□ -0.34
GTF2A2-202ENST00000396060 ARHGAP39Q9C0H5 1083 aa12.91□□□□□ -0.34
GTF2A2-202ENST00000396060 NLRC4Q9NPP4 1024 aa12.91□□□□□ -0.34
GTF2A2-202ENST00000396060 PRMT7Q9NVM4 692 aaPredicted RBP12.91□□□□□ -0.34
GTF2A2-202ENST00000396060 APEX2Q9UBZ4 518 aa12.91□□□□□ -0.34
GTF2A2-202ENST00000396060 TNFSF13BQ9Y275 285 aa12.91□□□□□ -0.34
GTF2A2-202ENST00000396060 REXO2Q9Y3B8 237 aaKnown RBP12.91□□□□□ -0.34
GTF2A2-202ENST00000396060 SMIM35A0A1B0GVV1 85 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 CLDN3O15551 220 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 GNRH1P01148 92 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 PSEN2P49810 448 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 MXI1P50539 228 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 GPC3P51654 580 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 AP3M2P53677 418 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 KIF22Q14807 665 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 PCBP1Q15365 356 aaKnown RBP eCLIP12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 IQCEQ6IPM2 695 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 SRGAP1Q7Z6B7 1085 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 TRIB2Q92519 343 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 ZBTB45Q96K62 511 aaPredicted RBP12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 C16orf45Q96MC5 204 aaPredicted RBP12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 FAM213AQ9BRX8 229 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 DESI2Q9BSY9 194 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 MSTO1Q9BUK6 570 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 KATNAL1Q9BW62 490 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 GABRQQ9UN88 632 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 PAXBP1Q9Y5B6 917 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 FHOD1Q9Y613 1164 aa12.9□□□□□ -0.34
GTF2A2-202ENST00000396060 OGTO15294 1046 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 ZC3H11AO75152 810 aaKnown RBP eCLIP12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 GFPT2O94808 682 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 SMIM10L2AP0DMW4 78 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 SMIM10L2BP0DMW5 78 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 EIF4A3P38919 411 aaKnown RBP12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 GCLMP48507 274 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 NLRP11P59045 1033 aaKnown RBP12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 IGBP1P78318 339 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 APBA1Q02410 837 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 MFSD10Q14728 455 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 SURF1Q15526 300 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 FSCN1Q16658 493 aaKnown RBP12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 AMHR2Q16671 573 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 KIAA0753Q2KHM9 967 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 DNTTIP2Q5QJE6 756 aaKnown RBP12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 FAM81BQ96LP2 452 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 MAP7D2Q96T17 732 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 HAUS4Q9H6D7 363 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 MYO1AQ9UBC5 1043 aa12.9□□□□□ -0.35
GTF2A2-202ENST00000396060 ZSWIM8A7E2V4 1837 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 CNTNAP2Q9UHC6 1331 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 TTLL13PA6NNM8 815 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 SEPT4O43236 478 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 ZEB2O60315 1214 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 FERP16591 822 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 HOXD10P28358 340 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 STAT1P42224 750 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 ARHGAP25P42331 645 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 PRPF4BQ13523 1007 aaKnown RBP12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 ASIC2Q16515 512 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 KYAT1Q16773 422 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 PHLDB3Q6NSJ2 640 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 NFRKBQ6P4R8 1299 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 MPZL3Q6UWV2 235 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 SV2AQ7L0J3 742 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 ACRBPQ8NEB7 543 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 LMBR1Q8WVP7 490 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 SPAG5Q96R06 1193 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 ADAMTS10Q9H324 1103 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 MINDY3Q9H8M7 445 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 SETD4Q9NVD3 440 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 RNF186Q9NXI6 227 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 DNAJC12Q9UKB3 198 aa12.89□□□□□ -0.35
GTF2A2-202ENST00000396060 A0A087WZ62 844 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 INO80B-WBP1J3KQ70 363 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 IPO7O95373 1038 aaKnown RBP12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 TBC1D8O95759 1140 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 GJB1P08034 283 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 CCDC172P0C7W6 258 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 SOX5P35711 763 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 KIF11P52732 1056 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 PRKCZQ05513 592 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 RAPGEF1Q13905 1077 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 ZACNQ401N2 412 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 ATF7IP2Q5U623 682 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 NME8Q8N427 588 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 FBXL13Q8NEE6 735 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 KIF18AQ8NI77 898 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 ZNF516Q92618 1163 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 CCDC127Q96BQ5 260 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 NLRP4Q96MN2 994 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 FDXACB1Q9BRP7 624 aaPredicted RBP12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 INO80BQ9C086 356 aaPredicted RBP12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 GPR88Q9GZN0 384 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 SRRDQ9UH36 339 aa12.88□□□□□ -0.35
GTF2A2-202ENST00000396060 CPSF3Q9UKF6 684 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms