RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 C2orf71A6NGG8 1288 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 KLRC4O43908 158 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 TLR2O60603 784 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 MAPK4P31152 587 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 CASP5P51878 434 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 YWHAGP61981 247 aaKnown RBP eCLIP9.42□□□□□ -0.9
RTN4-206ENST00000394611 PSMC6P62333 389 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ADCY2Q08462 1091 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 SDCCAG8Q86SQ7 713 aaPredicted RBP9.42□□□□□ -0.9
RTN4-206ENST00000394611 TXNRD3Q86VQ6 643 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 KIFAP3Q92845 792 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ERP44Q9BS26 406 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ATP6V0A4Q9HBG4 840 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 RNF14Q9UBS8 474 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 POLLQ9UGP5 575 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ALG6Q9Y672 507 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 BRCA1P38398 1863 aaKnown RBP9.42□□□□□ -0.9
RTN4-206ENST00000394611 CCDC188H7C350 402 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ENO1P06733 434 aaKnown RBP9.42□□□□□ -0.9
RTN4-206ENST00000394611 TROVE2P10155 538 aaKnown RBP eCLIP9.42□□□□□ -0.9
RTN4-206ENST00000394611 ATP5DP30049 168 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 FNTAP49354 379 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 MEI1Q5TIA1 1274 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 DCUN1D2Q6PH85 259 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 GUF1Q8N442 669 aaKnown RBP9.42□□□□□ -0.9
RTN4-206ENST00000394611 EFCAB3Q8N7B9 438 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 DNAJC9Q8WXX5 260 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ARHGEF26Q96DR7 871 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 SLC13A1Q9BZW2 595 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 KBTBD4Q9NVX7 518 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ZFATQ9P243 1243 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 USP20Q9Y2K6 914 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 RASSF10A6NK89 507 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ATP2A1O14983 1001 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 CYP26A1O43174 497 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 DRD4P21917 467 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 COMTP21964 271 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 MAN1A1P33908 653 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 NOP14P78316 857 aaKnown RBP9.42□□□□□ -0.9
RTN4-206ENST00000394611 BASP1P80723 227 aaKnown RBP9.42□□□□□ -0.9
RTN4-206ENST00000394611 KLC1Q07866 573 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 MEA1Q16626 185 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ARHGEF18Q6ZSZ5 1173 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ZBED8Q8IZ13 594 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 CCDC33Q8N5R6 958 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 CCDC110Q8TBZ0 833 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 NMD3Q96D46 503 aaKnown RBP9.42□□□□□ -0.9
RTN4-206ENST00000394611 ZNF668Q96K58 619 aaPredicted RBP9.42□□□□□ -0.9
RTN4-206ENST00000394611 BARHL2Q9NY43 387 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 INPP5FQ9Y2H2 1132 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 RABGAP1Q9Y3P9 1069 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 TCRBV5S4A2TA0A5A2 114 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 LRRC10BA6NIK2 292 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 SPDYE5A6NIY4 337 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 CAPN9O14815 690 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 CFLARO15519 480 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 CYTH3O43739 400 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 PSMC4P43686 418 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 LAMB3Q13751 1172 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 IL31Q6EBC2 164 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 RINT1Q6NUQ1 792 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 LLGL2Q6P1M3 1020 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 RGS9BPQ6ZS82 235 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 PALM2Q8IXS6 379 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
RTN4-206ENST00000394611 FIS1Q9Y3D6 152 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 A0A1B0GUL6 1792 aa9.42□□□□□ -0.9
RTN4-206ENST00000394611 ZNF804BA4D1E1 1349 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 TISP43B9A030 160 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 LDHCP07864 332 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 MYCLP12524 364 aaPredicted RBP9.41□□□□□ -0.9
RTN4-206ENST00000394611 TNNI1P19237 187 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 RPL21P46778 160 aaKnown RBP9.41□□□□□ -0.9
RTN4-206ENST00000394611 ARMC9Q7Z3E5 817 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 DCLK2Q8N568 766 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 RMDN2Q96LZ7 410 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 ANKRD2Q9GZV1 360 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 CDC42EP4Q9H3Q1 356 aaKnown RBP9.41□□□□□ -0.9
RTN4-206ENST00000394611 PIDD1Q9HB75 910 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 GDF3Q9NR23 364 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 ZMYND8Q9ULU4 1186 aaPredicted RBP9.41□□□□□ -0.9
RTN4-206ENST00000394611 ARL2BPQ9Y2Y0 163 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 BCRP11274 1271 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 CD19P15391 556 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 HSPA9P38646 679 aaKnown RBP9.41□□□□□ -0.9
RTN4-206ENST00000394611 PPP1R2P41236 205 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 CDK8P49336 464 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 EIF3BP55884 814 aaKnown RBP9.41□□□□□ -0.9
RTN4-206ENST00000394611 TBC1D16Q8TBP0 767 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 LRRC15Q8TF66 581 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 NUP85Q9BW27 656 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 RIC8AQ9NPQ8 531 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 TXLNGQ9NUQ3 528 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 SIK3Q9Y2K2 1263 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 C2CD2Q9Y426 696 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 MAD1L1Q9Y6D9 718 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 TCRBV7S2A1N4TA0A589 114 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 STXBP3O00186 592 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 GJB6O95452 261 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms