RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 FSCN1Q16658 493 aaKnown RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 ARHGAP29Q52LW3 1261 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 SEZ6Q53EL9 994 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 MARCH8Q5T0T0 291 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 IQCEQ6IPM2 695 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 KIAA1328Q86T90 577 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 TRPV1Q8NER1 839 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 TRIB2Q92519 343 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 FNBP1Q96RU3 617 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 ACO2Q99798 780 aaKnown RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 FDXACB1Q9BRP7 624 aaPredicted RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 TMEM117Q9H0C3 514 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 TOPORSQ9NS56 1045 aaPredicted RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 RBAKQ9NYW8 714 aaPredicted RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 DNAJC12Q9UKB3 198 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 Q9Y3F1 56 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 A0A0U1RQJ8 604 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 ACKR2O00590 384 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 CSDE1O75534 798 aaKnown RBP9.37□□□□□ -0.91
TDP1-203ENST00000393454 TOM1L1O75674 476 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 F2P00734 622 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 C6orf222P0C671 652 aaPredicted RBP9.37□□□□□ -0.91
TDP1-203ENST00000393454 TNNI1P19237 187 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 MBTD1Q05BQ5 628 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 KLHL30Q0D2K2 578 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 ARHGAP44Q17R89 818 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 KRT39Q6A163 491 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 NFRKBQ6P4R8 1299 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 SYT10Q6XYQ8 523 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 LMBR1Q8WVP7 490 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 ATRIPQ8WXE1 791 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 KAT2BQ92831 832 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.37□□□□□ -0.91
TDP1-203ENST00000393454 FAM49AQ9H0Q0 323 aaPredicted RBP9.37□□□□□ -0.91
TDP1-203ENST00000393454 MINDY3Q9H8M7 445 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 TMEM8AQ9HCN3 771 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 UBE2TQ9NPD8 197 aaPredicted RBP9.37□□□□□ -0.91
TDP1-203ENST00000393454 APEX2Q9UBZ4 518 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 FBXL5Q9UKA1 691 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 AJAP1Q9UKB5 411 aaPredicted RBP9.37□□□□□ -0.91
TDP1-203ENST00000393454 NRCAMQ92823 1304 aa9.37□□□□□ -0.91
TDP1-203ENST00000393454 EIF3CLB5ME19 914 aaKnown RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 B4GALT5O43286 388 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 ZEB2O60315 1214 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 DUSP11O75319 330 aaKnown RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 IGHA2P01877 340 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 YY1P25490 414 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 GTF2H1P32780 548 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 STAT1P42224 750 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 KIF11P52732 1056 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 GNG11P61952 73 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 CYP27A1Q02318 531 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 TMEM62Q0P6H9 643 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 TRIM32Q13049 653 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 PSMD6Q15008 389 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 EPC2Q52LR7 807 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 ZBTB41Q5SVQ8 909 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 ATF7IP2Q5U623 682 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 HGSNATQ68CP4 663 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 LMBRD2Q68DH5 695 aaPredicted RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 CRELD2Q6UXH1 353 aaPredicted RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 CDR2LQ86X02 465 aaPredicted RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 LINC01465Q8N7H1 131 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 KIF18AQ8NI77 898 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 FAM212AQ96EL1 285 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 EIF3CQ99613 913 aaKnown RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 STK33Q9BYT3 514 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 FZD8Q9H461 694 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 IFT122Q9HBG6 1241 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 SPC25Q9HBM1 224 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 PDE11AQ9HCR9 933 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 PRMT7Q9NVM4 692 aaPredicted RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 AIPL1Q9NZN9 384 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 DNAI1Q9UI46 699 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 MYO6Q9UM54 1294 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 GINS2Q9Y248 185 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 LRRN2O75325 713 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 GFPT2O94808 682 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 CLSTN1O94985 981 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 TUBB4AP04350 444 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 CYP2C9P11712 490 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 CYBAP13498 195 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 ELNP15502 786 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 ETF1P62495 437 aaKnown RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 BIRC3Q13489 604 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 DRAP1Q14919 205 aaPredicted RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 ZNF568Q3ZCX4 644 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 GNASQ5JWF2 1037 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 PHLDB3Q6NSJ2 640 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 MPZL3Q6UWV2 235 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 TSHZ1Q6ZSZ6 1077 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 THNSL1Q8IYQ7 743 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 KIAA0319LQ8IZA0 1049 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 ZNF784Q8NCA9 323 aaPredicted RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 FBXL13Q8NEE6 735 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 LMO3Q8TAP4 145 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 CD99L2Q8TCZ2 262 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 FAM84AQ96KN4 292 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 467.6 ms