RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ORC1Q13415 861 aa11□□□□□ -0.65
LTN1-203ENST00000389195 TARBP2Q15633 366 aaKnown RBP11□□□□□ -0.65
LTN1-203ENST00000389195 TMEM132AQ24JP5 1023 aa11□□□□□ -0.65
LTN1-203ENST00000389195 SPRYD7Q5W111 196 aa11□□□□□ -0.65
LTN1-203ENST00000389195 AADACL2Q6P093 401 aa11□□□□□ -0.65
LTN1-203ENST00000389195 C2orf69Q8N8R5 385 aa11□□□□□ -0.65
LTN1-203ENST00000389195 CPB2Q96IY4 423 aa11□□□□□ -0.65
LTN1-203ENST00000389195 PCDHB18PQ96TA0 734 aa11□□□□□ -0.65
LTN1-203ENST00000389195 MSTO1Q9BUK6 570 aa11□□□□□ -0.65
LTN1-203ENST00000389195 FLRT1Q9NZU1 646 aa11□□□□□ -0.65
LTN1-203ENST00000389195 MYO1AQ9UBC5 1043 aa11□□□□□ -0.65
LTN1-203ENST00000389195 AGO2Q9UKV8 859 aaKnown RBP11□□□□□ -0.65
LTN1-203ENST00000389195 IVNS1ABPQ9Y6Y0 642 aa11□□□□□ -0.65
LTN1-203ENST00000389195 GRID2IPA4D2P6 1211 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 EFCAB8A8MWE9 144 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 LCA5LO95447 670 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 CYP2B6P20813 491 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 STRN3Q13033 797 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 PRPF4BQ13523 1007 aaKnown RBP10.99□□□□□ -0.65
LTN1-203ENST00000389195 EEF1DP3Q658K8 133 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 NOP9Q86U38 636 aaKnown RBP10.99□□□□□ -0.65
LTN1-203ENST00000389195 PASD1Q8IV76 773 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 SLC9A9Q8IVB4 645 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 TEX2Q8IWB9 1127 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 MKNK1Q9BUB5 465 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 STK33Q9BYT3 514 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 SUCLA2Q9P2R7 463 aaPredicted RBP10.99□□□□□ -0.65
LTN1-203ENST00000389195 SSU72P8A0A1W2PR75 194 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 ZSCAN5CA6NGD5 496 aaPredicted RBP10.99□□□□□ -0.65
LTN1-203ENST00000389195 GRIN3BO60391 1043 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 STAM2O75886 525 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 CETPP11597 493 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 SMPD1P17405 629 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 COPB2P35606 906 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 ARHGAP1Q07960 439 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 TRADDQ15628 312 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 CREG2Q8IUH2 290 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 RPUSD2Q8IZ73 545 aaKnown RBP10.99□□□□□ -0.65
LTN1-203ENST00000389195 GPD1LQ8N335 351 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 KCTD17Q8N5Z5 321 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 RDM1Q8NG50 284 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 NRBP2Q9NSY0 501 aa10.99□□□□□ -0.65
LTN1-203ENST00000389195 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
LTN1-203ENST00000389195 TACC1O75410 805 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 SASH3O75995 380 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 IBSPP21815 317 aaPredicted RBP10.98□□□□□ -0.65
LTN1-203ENST00000389195 VSNL1P62760 191 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 TDRD10Q5VZ19 366 aaKnown RBP10.98□□□□□ -0.65
LTN1-203ENST00000389195 NAA35Q5VZE5 725 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 GOLGA5Q8TBA6 731 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 OSBPL9Q96SU4 736 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 MROH8Q9H579 483 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 RBAKQ9NYW8 714 aaPredicted RBP10.98□□□□□ -0.65
LTN1-203ENST00000389195 CTAGE15A4D2H0 777 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 DYNC1LI2O43237 492 aaPredicted RBP10.98□□□□□ -0.65
LTN1-203ENST00000389195 GJB6O95452 261 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 CTAGE8P0CG41 777 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 GUCY2FP51841 1108 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 GTF2A2P52657 109 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 ZNF200P98182 395 aaPredicted RBP10.98□□□□□ -0.65
LTN1-203ENST00000389195 PPARDQ03181 441 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 PPP2R5AQ15172 486 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 NAB2Q15742 525 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 ZNF792Q3KQV3 632 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 ARID2Q68CP9 1835 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
LTN1-203ENST00000389195 CTAGE6Q86UF2 777 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 CTAGE4Q8IX94 777 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 GOLGA1Q92805 767 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 NOX5Q96PH1 765 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 NIFKQ9BYG3 293 aaKnown RBP10.98□□□□□ -0.65
LTN1-203ENST00000389195 TRIM7Q9C029 511 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 FAM49AQ9H0Q0 323 aaPredicted RBP10.98□□□□□ -0.65
LTN1-203ENST00000389195 RAB20Q9NX57 234 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 COG5Q9UP83 839 aa10.98□□□□□ -0.65
LTN1-203ENST00000389195 A0A087WZ62 844 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 ESYT3A0FGR9 886 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 ZNF233A6NK53 670 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 MAFO75444 373 aaPredicted RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 LGALS2P05162 132 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 MYBL2P10244 700 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 CD58P19256 250 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 TNFAIP3P21580 790 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 BEX3Q00994 111 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 TTLL4Q14679 1199 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 BRDTQ58F21 947 aaPredicted RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 FAM160B1Q5W0V3 765 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 KRT39Q6A163 491 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 SCARA5Q6ZMJ2 495 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 HELQQ8TDG4 1101 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 SPIRE2Q8WWL2 714 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 FNBP1Q96RU3 617 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 FDXACB1Q9BRP7 624 aaPredicted RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 APOBEC3GQ9HC16 384 aaKnown RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 SETD4Q9NVD3 440 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 SNX12Q9UMY4 172 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 EXOC7Q9UPT5 735 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 LOC285556D6RIA3 1793 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 UBE4BO95155 1302 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 CLDN3O15551 220 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms