RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 OATP04181 439 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 CHRNB2P17787 502 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 GGCXP38435 758 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 CARSP49589 748 aaKnown RBP23.13■■□□□ 1.29
CNTFR-202ENST00000378980 POLGP54098 1239 aaPredicted RBP23.13■■□□□ 1.29
CNTFR-202ENST00000378980 PAK2Q13177 524 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 TCEAL1Q15170 157 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 NOP9Q86U38 636 aaKnown RBP23.13■■□□□ 1.29
CNTFR-202ENST00000378980 TAS1R2Q8TE23 839 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 ESYT3A0FGR9 886 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 GOLGA6BA6NDN3 693 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 FTLP02792 175 aaPredicted RBP23.12■■□□□ 1.29
CNTFR-202ENST00000378980 SEPT14Q6ZU15 432 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 NT5C1BQ96P26 610 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 RAB20Q9NX57 234 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 KCNG1Q9UIX4 513 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 ZHX1Q9UKY1 873 aaPredicted RBP23.12■■□□□ 1.29
CNTFR-202ENST00000378980 LRRC37A2A6NM11 1700 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 FAM170AA1A519 330 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 TULP1O00294 542 aaPredicted RBP23.12■■□□□ 1.29
CNTFR-202ENST00000378980 DDX3YO15523 660 aaKnown RBP23.12■■□□□ 1.29
CNTFR-202ENST00000378980 CYP26A1O43174 497 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 RTN2O75298 545 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 SV2AQ7L0J3 742 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 CASKIN2Q8WXE0 1202 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 KCNN1Q92952 543 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 PCDHB18PQ96TA0 734 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 FAM213AQ9BRX8 229 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 PLEKHA4Q9H4M7 779 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 DHX33Q9H6R0 707 aaKnown RBP23.12■■□□□ 1.29
CNTFR-202ENST00000378980 NFU1Q9UMS0 254 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 CSADQ9Y600 493 aa23.12■■□□□ 1.29
CNTFR-202ENST00000378980 CCDC188H7C350 402 aa23.11■■□□□ 1.29
CNTFR-202ENST00000378980 DLATP10515 647 aaKnown RBP23.11■■□□□ 1.29
CNTFR-202ENST00000378980 PRPF4BQ13523 1007 aaKnown RBP23.11■■□□□ 1.29
CNTFR-202ENST00000378980 SLC47A2Q86VL8 602 aa23.11■■□□□ 1.29
CNTFR-202ENST00000378980 AP1M1Q9BXS5 423 aa23.11■■□□□ 1.29
CNTFR-202ENST00000378980 TTC7AQ9ULT0 858 aaPredicted RBP23.11■■□□□ 1.29
CNTFR-202ENST00000378980 IGKV6D-21A0A0A0MT36 114 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 DDNO94850 711 aaPredicted RBP23.1■■□□□ 1.29
CNTFR-202ENST00000378980 GZMAP12544 262 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 UBA1P22314 1058 aaKnown RBP23.1■■□□□ 1.29
CNTFR-202ENST00000378980 EDNRBP24530 442 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 TSEN2Q8NCE0 465 aaKnown RBP23.1■■□□□ 1.29
CNTFR-202ENST00000378980 RIN2Q8WYP3 895 aaPredicted RBP23.1■■□□□ 1.29
CNTFR-202ENST00000378980 PORCNQ9H237 461 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 ADARB2Q9NS39 739 aaKnown RBP23.1■■□□□ 1.29
CNTFR-202ENST00000378980 DIS3Q9Y2L1 958 aaKnown RBP23.1■■□□□ 1.29
CNTFR-202ENST00000378980 ZNF233A6NK53 670 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 KRIT1O00522 736 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 EXTL3O43909 919 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 LIG4P49917 911 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 GPC5P78333 572 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 TAF3Q5VWG9 929 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 C11orf63Q6NUN7 778 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 IFT81Q8WYA0 676 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 TMEM143Q96AN5 459 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 SPATC1LQ9H0A9 340 aa23.1■■□□□ 1.29
CNTFR-202ENST00000378980 ADM5C9JUS6 153 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 SCP2P22307 547 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 FMO1Q01740 532 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 DCAF12L1Q5VU92 463 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 ASAP3Q8TDY4 903 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 CEP89Q96ST8 783 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 NIFKQ9BYG3 293 aaKnown RBP23.09■■□□□ 1.29
CNTFR-202ENST00000378980 FAM204AQ9H8W3 233 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 KIAA1586Q9HCI6 787 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 ACP6Q9NPH0 428 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 CTTNBP2NLQ9P2B4 639 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 STYXL1Q9Y6J8 313 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 SOWAHBA6NEL2 793 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 ERICH4A6NGS2 130 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 GLRA2P23416 452 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 STRN3Q13033 797 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 GADL1Q6ZQY3 521 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 DCPSQ96C86 337 aaKnown RBP23.09■■□□□ 1.29
CNTFR-202ENST00000378980 CARD9Q9H257 536 aa23.09■■□□□ 1.29
CNTFR-202ENST00000378980 SART1O43290 800 aaKnown RBP23.08■■□□□ 1.29
CNTFR-202ENST00000378980 FARP2O94887 1054 aaPredicted RBP23.08■■□□□ 1.29
CNTFR-202ENST00000378980 CLSTN1O94985 981 aa23.08■■□□□ 1.29
CNTFR-202ENST00000378980 MMEP08473 750 aa23.08■■□□□ 1.29
CNTFR-202ENST00000378980 CYP11B1P15538 503 aa23.08■■□□□ 1.29
CNTFR-202ENST00000378980 ARL2P36404 184 aa23.08■■□□□ 1.29
CNTFR-202ENST00000378980 NAMPTP43490 491 aa23.08■■□□□ 1.29
CNTFR-202ENST00000378980 C15orf39Q6ZRI6 1047 aa23.08■■□□□ 1.29
CNTFR-202ENST00000378980 SULF1Q8IWU6 871 aa23.08■■□□□ 1.29
CNTFR-202ENST00000378980 GSTTP1A0A1W2PQM5 241 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 BHMG1C9JSJ3 638 aaPredicted RBP23.07■■□□□ 1.28
CNTFR-202ENST00000378980 ZC3H11AO75152 810 aaKnown RBP eCLIP23.07■■□□□ 1.28
CNTFR-202ENST00000378980 PIGRP01833 764 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 FAM153BP0C7A2 387 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 ITGA4P13612 1032 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 LMAN1P49257 510 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 PDE6CP51160 858 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 ERVK-9P63128 1117 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 CLDN10P78369 228 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 FAM153CQ494X1 144 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 ALS2CLQ60I27 953 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 NCAPG2Q86XI2 1143 aa23.07■■□□□ 1.28
CNTFR-202ENST00000378980 EIF1ADQ8N9N8 165 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms