RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CHKAP35790 457 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 ZNF844Q08AG5 666 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 SMUG1Q53HV7 270 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 PPP6R3Q5H9R7 873 aaPredicted RBP12.49□□□□□ -0.41
NPHP4-202ENST00000378161 CMTR1Q8N1G2 835 aaKnown RBP12.49□□□□□ -0.41
NPHP4-202ENST00000378161 ITPKCQ96DU7 683 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 TSNARE1Q96NA8 513 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 AGAP1Q9UPQ3 857 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 MYPNQ86TC9 1320 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 CDC42BPGQ6DT37 1551 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 GOLGA8QA0A0J9YX86 632 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 GOLGA8OA6NCC3 632 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 GOLGA8NF8WBI6 632 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 GOLGA8RI6L899 631 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 MCF2P10911 925 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 OCRLQ01968 901 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 ANKRD20A4Q4UJ75 823 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 CABP7Q86V35 215 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 PPP1R14CQ8TAE6 165 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 PUS7LQ9H0K6 701 aaKnown RBP12.49□□□□□ -0.41
NPHP4-202ENST00000378161 CSRNP2Q9H175 543 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 EXOC7Q9UPT5 735 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 OVOS2A0A0J9YW53 1432 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 OVOS2Q6IE36 1432 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 VWDEQ8N2E2 1590 aa12.49□□□□□ -0.41
NPHP4-202ENST00000378161 TOM1O60784 492 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 MMP1P03956 469 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 PTGS2P35354 604 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 NXNQ6DKJ4 435 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 NUP93Q8N1F7 819 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 NLRP7Q8WX94 980 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 RPGRQ92834 1020 aaKnown RBP12.48□□□□□ -0.41
NPHP4-202ENST00000378161 PBKQ96KB5 322 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 CHMP2AO43633 222 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 BRAFP15056 766 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 POLGP54098 1239 aaPredicted RBP12.48□□□□□ -0.41
NPHP4-202ENST00000378161 RABGAP1LQ5R372 815 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 PPP1R2P3Q6NXS1 205 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 RNF169Q8NCN4 708 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 SYMPKQ92797 1274 aaKnown RBP12.48□□□□□ -0.41
NPHP4-202ENST00000378161 LRGUKQ96M69 825 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 GPATCH1Q9BRR8 931 aaKnown RBP12.48□□□□□ -0.41
NPHP4-202ENST00000378161 FAIMQ9NVQ4 179 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 BTG4Q9NY30 223 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 SLAIN2Q9P270 581 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 RASA4BC9J798 803 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 E9PMD0 336 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 RASA4O43374 803 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 ATP9BO43861 1147 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 PARNO95453 639 aaKnown RBP12.48□□□□□ -0.41
NPHP4-202ENST00000378161 GYPCP04921 128 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 PLCG2P16885 1265 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 TNNI2P48788 182 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 VWA3BQ502W6 1294 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 FRA10AC1Q70Z53 315 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 LPCAT2Q7L5N7 544 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 GPIHBP1Q8IV16 184 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 TOR1AIP2Q8NFQ8 470 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 ARHGEF3Q9NR81 526 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 AK5Q9Y6K8 562 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 FANCGO15287 622 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 TRMUO75648 421 aaKnown RBP12.48□□□□□ -0.41
NPHP4-202ENST00000378161 TNFRSF8P28908 595 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 CDC25AP30304 524 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 PHKA1P46020 1223 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 PTGDRQ13258 359 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 TRIP10Q15642 601 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 EAPPQ56P03 285 aaPredicted RBP12.48□□□□□ -0.41
NPHP4-202ENST00000378161 RRAGAQ7L523 313 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 KRT25Q7Z3Z0 450 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 ADSSL1Q8N142 457 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 TTC8Q8TAM2 541 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 FNDC8Q8TC99 324 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 AIFM3Q96NN9 605 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 TMEM237Q96Q45 408 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 ZSCAN10Q96SZ4 725 aaPredicted RBP12.48□□□□□ -0.41
NPHP4-202ENST00000378161 EHMT1Q9H9B1 1298 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 HOMER2Q9NSB8 354 aa12.48□□□□□ -0.41
NPHP4-202ENST00000378161 WDR19Q8NEZ3 1342 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 ZBED1O96006 694 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 GLI1P08151 1106 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 LONP1P36776 959 aaKnown RBP12.47□□□□□ -0.41
NPHP4-202ENST00000378161 ERVK-24P63145 666 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 BTG3Q14201 252 aaPredicted RBP12.47□□□□□ -0.41
NPHP4-202ENST00000378161 PABPC1LQ4VXU2 614 aaKnown RBP12.47□□□□□ -0.41
NPHP4-202ENST00000378161 RESP18Q5W5W9 173 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 NEK5Q6P3R8 708 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 PRR23CQ6ZRP0 262 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 FAM13CQ8NE31 585 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 SETDB2Q96T68 719 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 NLRC4Q9NPP4 1024 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 SRPRBQ9Y5M8 271 aaKnown RBP12.47□□□□□ -0.41
NPHP4-202ENST00000378161 FRMPD1Q5SYB0 1578 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 CPS1P31327 1500 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 DAPK3O43293 454 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 PSMG1O95456 288 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 HLA-DOAP06340 250 aa12.47□□□□□ -0.41
NPHP4-202ENST00000378161 PRLRP16471 622 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms