RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 NID2Q14112 1375 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 GOLGA8IPA6NC78 632 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 GOLGA8JA6NMD2 632 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 PSAPP07602 524 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 RASA1P20936 1047 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 VHLP40337 213 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 PTENP60484 403 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 DYNLT1P63172 113 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 GPS1Q13098 491 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 ZBED8Q8IZ13 594 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 CATSPER1Q8NEC5 780 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 RIOK1Q9BRS2 568 aaKnown RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 HEMGNQ9BXL5 484 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 MRPL40Q9NQ50 206 aaKnown RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 NARFQ9UHQ1 456 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 GTPBP10A4D1E9 387 aaKnown RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 LRRIQ4A6NIV6 560 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 NOP56O00567 594 aaKnown RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 ANP32DO95626 131 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 MYBP10242 640 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 ACADSP16219 412 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 PSMA2P25787 234 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 HOXA13P31271 388 aaPredicted RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 KPNA2P52292 529 aaKnown RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 PDCD2Q16342 344 aaPredicted RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 MOXD1Q6UVY6 613 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 TMC3Q7Z5M5 1100 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 ERICH1Q86X53 443 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 SCYL1Q96KG9 808 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 CEP170P1Q96L14 293 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 FAM161BQ96MY7 647 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 PARVAQ9NVD7 372 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 MTMR4Q9NYA4 1195 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 TCHHQ07283 1943 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 H0YIN7 160 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 PPP1R12AO14974 1030 aaPredicted RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 P4HBP07237 508 aaKnown RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 UBXN2AP68543 259 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 TFDP1Q14186 410 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 TBCCQ15814 346 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 TMEM154Q6P9G4 183 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 FAF2Q96CS3 445 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 ERP27Q96DN0 273 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 MTMR8Q96EF0 704 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 RANBP17Q9H2T7 1088 aaKnown RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 CD209Q9NNX6 404 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 ALG6Q9Y672 507 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 CAND2O75155 1236 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 TRIM49P0CI25 452 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 TRIM49CP0CI26 452 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 PDHBP11177 359 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 PEX3P56589 373 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 ITGB3BPQ13352 177 aaPredicted RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 CCDC125Q86Z20 511 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 ZKSCAN4Q969J2 545 aaPredicted RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 RXFP1Q9HBX9 757 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 TBC1D22BQ9NU19 505 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 NTSR2O95665 410 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 KRT7P08729 469 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 COMTP21964 271 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 C11orf63Q6NUN7 778 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 FOXR2Q6PJQ5 311 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 ZNF354CQ86Y25 554 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 TAB3Q8N5C8 712 aaPredicted RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 TMEM35BQ8NCS4 154 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 C1orf131Q8NDD1 294 aaKnown RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 POLR3CQ9BUI4 534 aaPredicted RBP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 PDP2Q9P2J9 529 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 HESX1Q9UBX0 185 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.32□□□□□ -0.92
PCDH9-202ENST00000377865 PCDHGC5Q9Y5F6 944 aa9.32□□□□□ -0.92
PCDH9-202ENST00000377865 RPS6KA4O75676 772 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 TFDP2Q14188 446 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 FAM98CQ17RN3 349 aaKnown RBP9.31□□□□□ -0.92
PCDH9-202ENST00000377865 ZNF746Q6NUN9 644 aaPredicted RBP9.31□□□□□ -0.92
PCDH9-202ENST00000377865 BRINP3Q76B58 766 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 ZNF677Q86XU0 584 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 SLC13A5Q86YT5 568 aaPredicted RBP9.31□□□□□ -0.92
PCDH9-202ENST00000377865 KIAA0895Q8NCT3 520 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 HDAC7Q8WUI4 952 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 SH3GL2Q99962 352 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 SIK3Q9Y2K2 1263 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 FLT1P17948 1338 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 ARHGAP10A1A4S6 786 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 KIAA0391O15091 583 aaKnown RBP9.31□□□□□ -0.92
PCDH9-202ENST00000377865 GSTA2P09210 222 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 RPA1P27694 616 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 HNRNPH3P31942 346 aaKnown RBP9.31□□□□□ -0.92
PCDH9-202ENST00000377865 PGM1P36871 562 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 SERPINB4P48594 390 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 BIRC2Q13490 618 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 PRPSAP1Q14558 356 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 LLGL1Q15334 1064 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 MMEL1Q495T6 779 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 ANO5Q75V66 913 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 FBXL13Q8NEE6 735 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 PGM2Q96G03 612 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 IL1RAPL1Q9NZN1 696 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 DCTN4Q9UJW0 460 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms