RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 TTLL6Q8N841 843 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 CD101Q93033 1021 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 GPRC5CQ9NQ84 441 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 ZNF536O15090 1300 aa27.2■■□□□ 1.95
C9orf40-201ENST00000376854 TMEM150BA6NC51 233 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 C5orf60A6NFR6 353 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 PMM2O15305 246 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 ADRB2P07550 413 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 PEX3P56589 373 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 ACTN3Q08043 901 aaPredicted RBP27.2■■□□□ 1.94
C9orf40-201ENST00000376854 TBC1D10BQ4KMP7 808 aaPredicted RBP27.2■■□□□ 1.94
C9orf40-201ENST00000376854 CCDC121Q6ZUS5 278 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 SEC16BQ96JE7 1060 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 NUP85Q9BW27 656 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 ST6GALNAC4Q9H4F1 302 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 PARP2Q9UGN5 583 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 USP20Q9Y2K6 914 aa27.2■■□□□ 1.94
C9orf40-201ENST00000376854 CCDC169A6NNP5 214 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 MMEP08473 750 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 MFAP3P55082 362 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 SNRPFP62306 86 aaKnown RBP27.19■■□□□ 1.94
C9orf40-201ENST00000376854 SPP2Q13103 211 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 SLC29A2Q14542 456 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 TRMT1LQ7Z2T5 733 aaKnown RBP27.19■■□□□ 1.94
C9orf40-201ENST00000376854 ARMC9Q7Z3E5 817 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 ZNF564Q8TBZ8 553 aaPredicted RBP27.19■■□□□ 1.94
C9orf40-201ENST00000376854 MTRF1LQ9UGC7 380 aaKnown RBP27.19■■□□□ 1.94
C9orf40-201ENST00000376854 UBIAD1Q9Y5Z9 338 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 SPOPO43791 374 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 LYPLA2O95372 231 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 TATDN2Q93075 761 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 PGM2Q96G03 612 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 CABS1Q96KC9 395 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 BTBD6Q96KE9 485 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 IWS1Q96ST2 819 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 STK32BQ9NY57 414 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 PCDHA3Q9Y5H8 950 aa27.19■■□□□ 1.94
C9orf40-201ENST00000376854 TCRBV7S2A1N4TA0A589 114 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 TLDC2A0PJX2 215 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 FMO1Q01740 532 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 DRP2Q13474 957 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 MTMR1Q13613 665 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 CBWD2Q8IUF1 395 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 CLEC4DQ8WXI8 215 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 SHC3Q92529 594 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 SEMA4DQ92854 862 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 MTUS1Q9ULD2 1270 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 PHF20L1A8MW92 1017 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 ALAS1P13196 640 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 MRPS9P82933 396 aaKnown RBP27.18■■□□□ 1.94
C9orf40-201ENST00000376854 ERMARDQ5T6L9 678 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 CPLX4Q7Z7G2 160 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 CPNE8Q86YQ8 564 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 CCDC105Q8IYK2 499 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 CACNA2D3Q8IZS8 1091 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 CENPTQ96BT3 561 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 XPO6Q96QU8 1125 aaKnown RBP27.18■■□□□ 1.94
C9orf40-201ENST00000376854 SEMA4AQ9H3S1 761 aa27.18■■□□□ 1.94
C9orf40-201ENST00000376854 CYP1A2P05177 515 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 RXRBP28702 533 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 GTF2A1P52655 376 aaPredicted RBP27.17■■□□□ 1.94
C9orf40-201ENST00000376854 NCKAP1LP55160 1127 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 SNRNP35Q16560 246 aaKnown RBP27.17■■□□□ 1.94
C9orf40-201ENST00000376854 UGCGQ16739 394 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 NBPF9Q3BBW0 867 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 PCNX4Q63HM2 1172 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 SLC13A5Q86YT5 568 aaPredicted RBP27.17■■□□□ 1.94
C9orf40-201ENST00000376854 CCDC13Q8IYE1 715 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 CCDC127Q96BQ5 260 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 ZNF653Q96CK0 615 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 SMIM23A6NLE4 172 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 TBC1D12O60347 775 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 COILP38432 576 aaPredicted RBP27.17■■□□□ 1.94
C9orf40-201ENST00000376854 DGKZQ13574 1117 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 CYP1B1Q16678 543 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 RTKN2Q8IZC4 609 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 TIPINQ9BVW5 301 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 AZI2Q9H6S1 392 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 PTPN22Q9Y2R2 807 aa27.17■■□□□ 1.94
C9orf40-201ENST00000376854 ASTN2O75129 1339 aaPredicted RBP27.17■■□□□ 1.94
C9orf40-201ENST00000376854 RGS16O15492 202 aaPredicted RBP27.16■■□□□ 1.94
C9orf40-201ENST00000376854 PLCB4Q15147 1175 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 FAM102BQ5T8I3 360 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 GKAP1Q5VSY0 366 aaPredicted RBP27.16■■□□□ 1.94
C9orf40-201ENST00000376854 MCF2L2Q86YR7 1114 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 SAAL1Q96ER3 474 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 FAM129AQ9BZQ8 928 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 TBC1D22BQ9NU19 505 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 PGAP2Q9UHJ9 254 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 CNOT7Q9UIV1 285 aaKnown RBP27.16■■□□□ 1.94
C9orf40-201ENST00000376854 GTF3C4Q9UKN8 822 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 CTNND1O60716 968 aaKnown RBP27.16■■□□□ 1.94
C9orf40-201ENST00000376854 CYP11B1P15538 503 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 DRD4P21917 467 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 ADSSP30520 456 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 KRT39Q6A163 491 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 CHMP6Q96FZ7 201 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 SELENOSQ9BQE4 189 aa27.16■■□□□ 1.94
C9orf40-201ENST00000376854 GOLGA6L7A0A1B0GV03 622 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 ANKRD63C9JTQ0 380 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms