RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 DIAPH2O60879 1101 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 MMP10P09238 476 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 KITP10721 976 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 KCNJ1P48048 391 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 GPSM2P81274 684 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 SLC29A2Q14542 456 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 FAM47CQ5HY64 1035 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 TMCO4Q5TGY1 634 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 SLC30A5Q8TAD4 765 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 MYCBPAPQ8TBZ2 947 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 SGSM3Q96HU1 749 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 FAM96AQ9H5X1 160 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 RAVER2Q9HCJ3 691 aaKnown RBP12.26□□□□□ -0.45
PTCH1-203ENST00000375274 GABBR1Q9UBS5 961 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 MARK3P27448 753 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 ELF1P32519 619 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 THOC5Q13769 683 aaKnown RBP12.26□□□□□ -0.45
PTCH1-203ENST00000375274 HIF1AQ16665 826 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 LRRC23Q53EV4 343 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-203ENST00000375274 KDM7AQ6ZMT4 941 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 SYDE1Q6ZW31 735 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-203ENST00000375274 MASTLQ96GX5 879 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 RPS6KC1Q96S38 1066 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 FEM1BQ9UK73 627 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 CCT8L1PA6NM43 557 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 PSMC1P62191 440 aaKnown RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 FBXO33Q7Z6M2 555 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 RAB44Q7Z6P3 723 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 NUDCD3Q8IVD9 361 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 DRC3Q9H069 523 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 CYP26B1Q9NR63 512 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 RAB21Q9UL25 225 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 DAGLAQ9Y4D2 1042 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 RPA1P27694 616 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 HERVK_113P62684 666 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 KYNUQ16719 465 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 TRIML2Q8N7C3 387 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 ARMC2Q8NEN0 867 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 SH2D3AQ9BRG2 576 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 UPF3AQ9H1J1 476 aaKnown RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 CXorf56Q9H5V9 222 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 SLC5A4Q9NY91 659 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 SMG5Q9UPR3 1016 aaKnown RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 CEP170BQ9Y4F5 1589 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 TMEM120BA0PK00 339 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 KCNQ2O43526 872 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 CAMTA2O94983 1202 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 COMTP21964 271 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 NOP14P78316 857 aaKnown RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 CDK17Q00537 523 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 FSCBQ5H9T9 825 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 C16orf86Q6ZW13 317 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 GPD1LQ8N335 351 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 PRPF38AQ8NAV1 312 aaKnown RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 CASKIN2Q8WXE0 1202 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 MKNK1Q9BUB5 465 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 ADAM33Q9BZ11 813 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 SLC13A1Q9BZW2 595 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 OVOS2A0A0G2JMS6 1433 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 SMARCA1P28370 1054 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 BCAR1P56945 870 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 SULF1Q8IWU6 871 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 SIX6OS1Q8N1H7 587 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 VPS11Q9H270 941 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 TSPYL2Q9H2G4 693 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 SLC40A1Q9NP59 571 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 PARVAQ9NVD7 372 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 RBAKQ9NYW8 714 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-203ENST00000375274 HSPBP1Q9NZL4 362 aa12.25□□□□□ -0.45
PTCH1-203ENST00000375274 PI4K2BG5E9Z4 385 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 SETSIPP0DME0 302 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 EZH2Q15910 746 aaKnown RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 SWSAP1Q6NVH7 229 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 RHPN2Q8IUC4 686 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 DAGLBQ8NCG7 672 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 NSUN6Q8TEA1 469 aaKnown RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 ROPN1BQ9BZX4 212 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 ROPN1Q9HAT0 212 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 BATF3Q9NR55 127 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 NDE1Q9NXR1 346 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 DDX56Q9NY93 547 aaKnown RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 SARSP49591 514 aaKnown RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 AP2B1P63010 937 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 DEUP1Q05D60 604 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 MKRN4PQ13434 485 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 ZC2HC1CQ53FD0 456 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 TAF1BQ53T94 588 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 CENPPQ6IPU0 288 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 OR6B3Q8NGW1 331 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 MDM1Q8TC05 714 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 PPP1R16BQ96T49 567 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 TRIM56Q9BRZ2 755 aaKnown RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 ARHGAP20Q9P2F6 1191 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 AGO2Q9UKV8 859 aaKnown RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 TRPC5Q9UL62 973 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms