RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 PRKD2Q9BZL6 878 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 NT5C3AQ9H0P0 336 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 CSRNP2Q9H175 543 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 MINDY3Q9H8M7 445 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 PARP2Q9UGN5 583 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 ADAM28Q9UKQ2 775 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 POLIQ9UNA4 740 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 GIT1Q9Y2X7 761 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 CYP46A1Q9Y6A2 500 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 TGM5O43548 720 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 TSPAN1O60635 241 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 C1RP00736 705 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 CYP4A11Q02928 519 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 GRIK3Q13003 919 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 STK3Q13188 491 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 KIAA0319Q5VV43 1072 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 MTSS1LQ765P7 747 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 TAS1R1Q7RTX1 841 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 C1orf210Q8IVY1 113 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 TPH2Q8IWU9 490 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 SLFN12Q8IYM2 578 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 SMG8Q8ND04 991 aaKnown RBP15.7■□□□□ 0.1
PTCH1-202ENST00000375271 SECISBP2LQ93073 1101 aaKnown RBP15.7■□□□□ 0.1
PTCH1-202ENST00000375271 ZFP42Q96MM3 310 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 MBOAT7Q96N66 472 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 AGXT2Q9BYV1 514 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 BCO2Q9BYV7 579 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 FNIP2Q9P278 1114 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 VAV3Q9UKW4 847 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 HES2Q9Y543 173 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 NUMBLQ9Y6R0 609 aa15.7■□□□□ 0.1
PTCH1-202ENST00000375271 TBX3O15119 743 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 EDIL3O43854 480 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 XYLBO75191 536 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 PTENP60484 403 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 DSC1Q08554 894 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 PUM1Q14671 1186 aaKnown RBP eCLIP15.69■□□□□ 0.1
PTCH1-202ENST00000375271 PPM1LQ5SGD2 360 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 RUFY3Q7L099 469 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 CEP57Q86XR8 500 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 KCNB2Q92953 911 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 DYDC2Q96IM9 177 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 BRMS1Q9HCU9 246 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 SPATA6Q9NWH7 488 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-202ENST00000375271 NCDNQ9UBB6 729 aa15.69■□□□□ 0.1
PTCH1-202ENST00000375271 LAMTOR5O43504 91 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 ZMYND10O75800 440 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 NPTXRO95502 500 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 SP9P0CG40 484 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 PFKPQ01813 784 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 HTR4Q13639 388 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 CTTNQ14247 550 aaKnown RBP15.68■□□□□ 0.1
PTCH1-202ENST00000375271 UBXN2BQ14CS0 331 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 PDXDC1Q6P996 788 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 SLC27A1Q6PCB7 646 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 PIK3AP1Q6ZUJ8 805 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 GPR65Q8IYL9 337 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 ZNF579Q8NAF0 562 aaKnown RBP15.68■□□□□ 0.1
PTCH1-202ENST00000375271 PJA1Q8NG27 643 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 ZNF707Q96C28 371 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-202ENST00000375271 RMDN1Q96DB5 314 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 ZNF274Q96GC6 653 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-202ENST00000375271 B3GALT6Q96L58 329 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 NXF3Q9H4D5 531 aaKnown RBP15.68■□□□□ 0.1
PTCH1-202ENST00000375271 KCNMB3Q9NPA1 279 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 SLC2A4RGQ9NR83 387 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 RGL1Q9NZL6 768 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 KCNJ14Q9UNX9 436 aa15.68■□□□□ 0.1
PTCH1-202ENST00000375271 GVINP1Q7Z2Y8 2422 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 MTCL1Q9Y4B5 1905 aaKnown RBP15.67■□□□□ 0.1
PTCH1-202ENST00000375271 DGAT1O75907 488 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 HNRNPA1P09651 372 aaKnown RBP eCLIP15.67■□□□□ 0.1
PTCH1-202ENST00000375271 RPL17P18621 184 aaKnown RBP15.67■□□□□ 0.1
PTCH1-202ENST00000375271 AKAP5P24588 427 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 EVCP57679 992 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 ELAVL2Q12926 359 aaKnown RBP15.67■□□□□ 0.1
PTCH1-202ENST00000375271 HSP90AA2PQ14568 343 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-202ENST00000375271 GRASPQ7Z6J2 395 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-202ENST00000375271 SKAP1Q86WV1 359 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 ZBTB8OSQ8IWT0 167 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 RNF168Q8IYW5 571 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-202ENST00000375271 TTPALQ9BTX7 342 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 GPR62Q9BZJ7 368 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 FOXQ1Q9C009 403 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 RNF39Q9H2S5 420 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 CHST7Q9NS84 486 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 KLK14Q9P0G3 267 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 CDH7Q9ULB5 785 aa15.67■□□□□ 0.1
PTCH1-202ENST00000375271 ARID2Q68CP9 1835 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 LRRIQ4A6NIV6 560 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 F8W810 466 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 M0R2N6 131 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 ARF4P18085 180 aaPredicted RBP15.66■□□□□ 0.1
PTCH1-202ENST00000375271 MBTD1Q05BQ5 628 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 PSMD5Q16401 504 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 ST13P5Q8NFI4 369 aaPredicted RBP15.66■□□□□ 0.1
PTCH1-202ENST00000375271 HASPINQ8TF76 798 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 ATRIPQ8WXE1 791 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 WASF1Q92558 559 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms