RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 GNPTABQ3T906 1256 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 SEL1L2Q5TEA6 688 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 MAEAQ7L5Y9 396 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 CROCCP2Q86T23 111 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 EFCAB13Q8IY85 973 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 WNK4Q96J92 1243 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 ZIM3Q96PE6 472 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 TAAR1Q96RJ0 339 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 GPR88Q9GZN0 384 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 WNT8AQ9H1J5 351 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 PCIF1Q9H4Z3 704 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 ACAD9Q9H845 621 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 NMRK2Q9NPI5 230 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 KMT5AQ9NQR1 393 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 CTTNBP2NLQ9P2B4 639 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 PARP2Q9UGN5 583 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 ZNF214Q9UL59 606 aaPredicted RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 TBX20Q9UMR3 447 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 NFASCO94856 1347 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 TESPA1A2RU30 521 aaPredicted RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 FOXN3O00409 490 aaPredicted RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 ABCB4P21439 1286 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 GARTP22102 1010 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 RNASE9P60153 205 aaKnown RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 BIRC3Q13489 604 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 PHLDB3Q6NSJ2 640 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 PPP1R2P3Q6NXS1 205 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 NSMFQ6X4W1 530 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 SPATS2Q86XZ4 545 aaKnown RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 IQCKQ8N0W5 287 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 TSEN2Q8NCE0 465 aaKnown RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 CHST13Q8NET6 341 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 IL31RAQ8NI17 732 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 LMO3Q8TAP4 145 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 NSUN6Q8TEA1 469 aaKnown RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 ZNF526Q8TF50 670 aaPredicted RBP13.18□□□□□ -0.3
UBR4-203ENST00000375225 TRIM11Q96F44 468 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 NT5C1BQ96P26 610 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 FAM129AQ9BZQ8 928 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 UVRAGQ9P2Y5 699 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 FBXO40Q9UH90 709 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
UBR4-203ENST00000375225 BACH1O14867 736 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 SLC16A4O15374 487 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 LRRN2O75325 713 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 DGAT1O75907 488 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 MTA2O94776 668 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 MYZAPP0CAP1 466 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 COPB2P35606 906 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 USP8P40818 1118 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 GCLMP48507 274 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 PDE6CP51160 858 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 GUCY2FP51841 1108 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 GTF2A2P52657 109 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 EIF3BP55884 814 aaKnown RBP13.17□□□□□ -0.3
UBR4-203ENST00000375225 SNRNP35Q16560 246 aaKnown RBP13.17□□□□□ -0.3
UBR4-203ENST00000375225 LRRC31Q6UY01 552 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 LBX2Q6XYB7 198 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 KDM7AQ6ZMT4 941 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 RPUSD2Q8IZ73 545 aaKnown RBP13.17□□□□□ -0.3
UBR4-203ENST00000375225 GTF3C2Q8WUA4 911 aaPredicted RBP13.17□□□□□ -0.3
UBR4-203ENST00000375225 RIN2Q8WYP3 895 aaPredicted RBP13.17□□□□□ -0.3
UBR4-203ENST00000375225 DHX38Q92620 1227 aaKnown RBP13.17□□□□□ -0.3
UBR4-203ENST00000375225 ZFP91Q96JP5 570 aaPredicted RBP13.17□□□□□ -0.3
UBR4-203ENST00000375225 CBWD1Q9BRT8 395 aa13.17□□□□□ -0.3
UBR4-203ENST00000375225 NTPCRQ9BSD7 190 aaKnown RBP13.17□□□□□ -0.3
UBR4-203ENST00000375225 ASCC2Q9H1I8 757 aaPredicted RBP13.17□□□□□ -0.3
UBR4-203ENST00000375225 IGSF9BQ9UPX0 1349 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 SRRM3A6NNA2 597 aaPredicted RBP13.16□□□□□ -0.3
UBR4-203ENST00000375225 PODXLO00592 558 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 FGGP02679 453 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 FTLP02792 175 aaPredicted RBP13.16□□□□□ -0.3
UBR4-203ENST00000375225 CETPP11597 493 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 CHRNA3P32297 505 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 GPC3P51654 580 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 BPIFB4P59827 614 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 PTENP60484 403 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 PPP3CAQ08209 521 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 PRPF4BQ13523 1007 aaKnown RBP13.16□□□□□ -0.3
UBR4-203ENST00000375225 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
UBR4-203ENST00000375225 MIS18BP1Q6P0N0 1132 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 VSIG10LQ86VR7 867 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 FAM71AQ8IYT1 594 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 MAIP1Q8WWC4 291 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 CEP170P1Q96L14 293 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 RNPC3Q96LT9 517 aaKnown RBP13.16□□□□□ -0.3
UBR4-203ENST00000375225 CEP89Q96ST8 783 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 AP1M1Q9BXS5 423 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 TMEM117Q9H0C3 514 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 THAP2Q9H0W7 228 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 BCAS3Q9H6U6 928 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 ATP6V0A4Q9HBG4 840 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 COQ4Q9Y3A0 265 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 SRCAPQ6ZRS2 3230 aa13.16□□□□□ -0.3
UBR4-203ENST00000375225 DENND3A2RUS2 1198 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 BHMG1C9JSJ3 638 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms