RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 PPP3CAQ08209 521 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 FAM160B1Q5W0V3 765 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 PHLDB3Q6NSJ2 640 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 GADL1Q6ZQY3 521 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 TRIM74Q86UV6 250 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 TRIM73Q86UV7 250 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 POMGNT1Q8WZA1 660 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 MFSD14AQ96MC6 490 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 FBXL18Q96ME1 805 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 UBXN6Q9BZV1 441 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 TMEM8AQ9HCN3 771 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 NRBP2Q9NSY0 501 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 MAFBQ9Y5Q3 323 aaPredicted RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 A0A0G2JLL6 359 aaPredicted RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 DDNO94850 711 aaPredicted RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 FTCDO95954 541 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 DLG4P78352 724 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 SKIDA1Q1XH10 827 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 KCNV1Q6PIU1 500 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 TSHZ1Q6ZSZ6 1077 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 PRRT2Q7Z6L0 340 aaPredicted RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 ANKRD13AQ8IZ07 590 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 GPD1LQ8N335 351 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 TPCN2Q8NHX9 752 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 CCDC26Q8TAB7 109 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 BICD1Q96G01 975 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 AGPAT1Q99943 283 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 GPR88Q9GZN0 384 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 SPATC1LQ9H0A9 340 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 POLR3FQ9H1D9 316 aaPredicted RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 CHCHD3Q9NX63 227 aaKnown RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 COQ4Q9Y3A0 265 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 A0A0G2JMZ2 1700 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 NCANO14594 1321 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 ANKRD62A6NC57 917 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 TISP43B9A030 160 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 ANKRD63C9JTQ0 380 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 KIF4AO95239 1232 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 CPP00450 1065 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 OATP04181 439 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 CXCR5P32302 372 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 RFC5P40937 340 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 GALCP54803 685 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 SP4Q02446 784 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 STRN3Q13033 797 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 CASP8Q14790 479 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 TREML2Q5T2D2 321 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 CCNI2Q6ZMN8 369 aaPredicted RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 CYFIP1Q7L576 1253 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 LNX1Q8TBB1 728 aaPredicted RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 PARD3BQ8TEW8 1205 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 RFFLQ8WZ73 363 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 SYT11Q9BT88 431 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 TMEM117Q9H0C3 514 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 SUCLA2Q9P2R7 463 aaPredicted RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 DIS3Q9Y2L1 958 aaKnown RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 UTRNP46939 3433 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 FOXN3O00409 490 aaPredicted RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 HNRNPDLO14979 420 aaKnown RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 MYBL2P10244 700 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 HNRNPH1P31943 449 aaKnown RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 CLNS1AP54105 237 aaKnown RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 TNNC1P63316 161 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 EMC2Q15006 297 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 MTERF2Q49AM1 385 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 C1orf220Q5T0J3 134 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 SLFN12LQ6IEE8 588 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 C8orf74Q6P047 294 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 SEPT14Q6ZU15 432 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 ENOSF1Q7L5Y1 443 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 PEX26Q7Z412 305 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 SLFN11Q7Z7L1 901 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 NCAPG2Q86XI2 1143 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 GLYCTKQ8IVS8 523 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 RHOT2Q8IXI1 618 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 EXOC8Q8IYI6 725 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 FAXDC2Q96IV6 333 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 NIFKQ9BYG3 293 aaKnown RBP8.85□□□□□ -0.99
UBR4-202ENST00000375224 XPNPEP1Q9NQW7 623 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 RNF181Q9P0P0 153 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 ARHGAP28Q9P2N2 729 aa8.85□□□□□ -0.99
UBR4-202ENST00000375224 GOLGA8IPA6NC78 632 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 ZNF233A6NK53 670 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 GOLGA8JA6NMD2 632 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 ZC3H11AO75152 810 aaKnown RBP eCLIP8.84□□□□□ -0.992e-9■■□□□ 12.3
UBR4-202ENST00000375224 ADRB2P07550 413 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 EDNRBP24530 442 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 ADSSP30520 456 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 GPC3P51654 580 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 CRYMQ14894 314 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 SETDB1Q15047 1291 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 CLUL1Q15846 466 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 HSP90B2PQ58FF3 399 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 CBWD2Q8IUF1 395 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 LRRC57Q8N9N7 239 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 FBXL13Q8NEE6 735 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
UBR4-202ENST00000375224 SLC7A3Q8WY07 619 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 BSNDQ8WZ55 320 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 FAM167AQ96KS9 214 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms