RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 WDR37Q9Y2I8 494 aa9.71□□□□□ -0.85
UBR4-201ENST00000375218 ASGR2P07307 311 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 KCNQ4P56696 695 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 SURF1Q15526 300 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 MAPKAPK3Q16644 382 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 MAP3K21Q5TCX8 1036 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 KIF6Q6ZMV9 814 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 MARK2Q7KZI7 788 aaKnown RBP9.71□□□□□ -0.86
UBR4-201ENST00000375218 CAND1Q86VP6 1230 aaKnown RBP9.71□□□□□ -0.86
UBR4-201ENST00000375218 CCAR2Q8N163 923 aaKnown RBP9.71□□□□□ -0.86
UBR4-201ENST00000375218 TTC13Q8NBP0 860 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 RRP36Q96EU6 259 aaKnown RBP9.71□□□□□ -0.86
UBR4-201ENST00000375218 MAELQ96JY0 434 aaKnown RBP9.71□□□□□ -0.86
UBR4-201ENST00000375218 ASB2Q96Q27 587 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 SIKE1Q9BRV8 207 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 SERHL2Q9H4I8 314 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 RGS17Q9UGC6 210 aaPredicted RBP9.71□□□□□ -0.86
UBR4-201ENST00000375218 TAF6LQ9Y6J9 622 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 RAD50Q92878 1312 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 TCHHQ07283 1943 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 NUDT19A8MXV4 375 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 HNRNPCL2B2RXH8 293 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 RANBP6O60518 1105 aaKnown RBP9.71□□□□□ -0.86
UBR4-201ENST00000375218 HNRNPCL1O60812 293 aaKnown RBP9.71□□□□□ -0.86
UBR4-201ENST00000375218 TFEBP19484 476 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 GNA13Q14344 377 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 STAT4Q14765 748 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 CEP78Q5JTW2 689 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 IKBIPQ70UQ0 350 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 CNKSR1Q969H4 720 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 TLR7Q9NYK1 1049 aaKnown RBP9.71□□□□□ -0.86
UBR4-201ENST00000375218 HSPBP1Q9NZL4 362 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 IL1RAPL1Q9NZN1 696 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 EMC3Q9P0I2 261 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 TTC41PQ6P2S7 1318 aa9.71□□□□□ -0.86
UBR4-201ENST00000375218 A0A1W2PPH5 198 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 SPTLC1O15269 473 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 FOXP2O15409 715 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 ERLIN2O94905 339 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 FBXO45P0C2W1 286 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 CES1P23141 567 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 SCNN1BP51168 640 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 DR1Q01658 176 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 GUCA2AQ02747 115 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 RUNX1T1Q06455 604 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 PABPC4Q13310 644 aaKnown RBP eCLIP9.7□□□□□ -0.86
UBR4-201ENST00000375218 KIAA0319Q5VV43 1072 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 ATCAYQ86WG3 371 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 Q8NFD4 153 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 TRIM58Q8NG06 486 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 KIAA1191Q96A73 305 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 PLIN2Q99541 437 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 CLSTN2Q9H4D0 955 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 PRDM5Q9NQX1 630 aaPredicted RBP9.7□□□□□ -0.86
UBR4-201ENST00000375218 CACNA1SQ13698 1873 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 PI4KAP2A4QPH2 592 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 RGSL1A5PLK6 1076 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 AREL1O15033 823 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 ABCB7O75027 752 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 GLRX3O76003 335 aaKnown RBP9.7□□□□□ -0.86
UBR4-201ENST00000375218 CNOT4O95628 575 aaKnown RBP9.7□□□□□ -0.86
UBR4-201ENST00000375218 POTEJP0CG39 1038 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 IL6STP40189 918 aaPredicted RBP9.7□□□□□ -0.86
UBR4-201ENST00000375218 PPIDQ08752 370 aaKnown RBP9.7□□□□□ -0.86
UBR4-201ENST00000375218 TLR1Q15399 786 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 FAM182BQ5T319 152 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 WDR73Q6P4I2 378 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 ZNF574Q6ZN55 896 aaPredicted RBP9.7□□□□□ -0.86
UBR4-201ENST00000375218 ITPRIPQ8IWB1 547 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 PI4KAP1Q8N8J0 262 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 AVL9Q8NBF6 648 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 ASB12Q8WXK4 309 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 NINJ1Q92982 152 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 HLA-CQ95604 372 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 MS4A4AQ96JQ5 239 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 SGCZQ96LD1 299 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 SPATA31A5Q5VU36 1347 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 SPATA31A7Q8IWB4 1347 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 MGEA5O60502 916 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 ADAMTS4O75173 837 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 PIAS2O75928 621 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 DDX58O95786 925 aaKnown RBP9.7□□□□□ -0.86
UBR4-201ENST00000375218 PPP1R2P41236 205 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 ITPK1Q13572 414 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 PPP1R2P3Q6NXS1 205 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 MEX3BQ6ZN04 569 aaKnown RBP9.7□□□□□ -0.86
UBR4-201ENST00000375218 STK32CQ86UX6 486 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 KCNG4Q8TDN1 519 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 RILPL2Q969X0 211 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 STRN4Q9NRL3 753 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 PPARGC1AQ9UBK2 798 aaKnown RBP9.7□□□□□ -0.86
UBR4-201ENST00000375218 SUCOQ9UBS9 1254 aaKnown RBP9.7□□□□□ -0.86
UBR4-201ENST00000375218 TEKT2Q9UIF3 430 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 UBN2Q6ZU65 1347 aa9.7□□□□□ -0.86
UBR4-201ENST00000375218 GOLGA8JA6NMD2 632 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 GOLGA8TH3BQL2 631 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 MCF2LO15068 1137 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 GOLGA8HP0CJ92 632 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 DDX5P17844 614 aaKnown RBP9.69□□□□□ -0.86
UBR4-201ENST00000375218 ALDH5A1P51649 535 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms