RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 EDEM3Q9BZQ6 932 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 ARNT2Q9HBZ2 717 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 CASS4Q9NQ75 786 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 GPRC5CQ9NQ84 441 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 CYLDQ9NQC7 956 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 PPP1R9AQ9ULJ8 1098 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 RRP15Q9Y3B9 282 aaKnown RBP6.92□□□□□ -1.3
CHD6-202ENST00000373222 PCDHGA10Q9Y5H3 936 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 ATRNL1Q5VV63 1379 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 GRIN2DO15399 1336 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 WIPF1O43516 503 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 DGAT1O75907 488 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 EPB41P11171 864 aaKnown RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 EPHB4P54760 987 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 GALCP54803 685 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 POU5F1BQ06416 359 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 MAPK7Q13164 816 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 DRAP1Q14919 205 aaPredicted RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 UGCGQ16739 394 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 NBPF9Q3BBW0 867 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 MOXD1Q6UVY6 613 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 BTNL9Q6UXG8 535 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 GBP6Q6ZN66 633 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 SRLQ86TD4 932 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 JAMLQ86YT9 394 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 C1orf131Q8NDD1 294 aaKnown RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 TPCN2Q8NHX9 752 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 WNK4Q96J92 1243 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 ZNF577Q9BSK1 485 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 KIFC3Q9BVG8 833 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 TRIM31Q9BZY9 425 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 GDF3Q9NR23 364 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 AGPAT3Q9NRZ7 376 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 SEPT11Q9NVA2 429 aaKnown RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 AMACRQ9UHK6 382 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 FEZ2Q9UHY8 353 aaPredicted RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 TPX2Q9ULW0 747 aaKnown RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 USP20Q9Y2K6 914 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 SAMM50Q9Y512 469 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 GOLGA8IPA6NC78 632 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 GOLGA8JA6NMD2 632 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 F8VZ95 297 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 IPO5O00410 1097 aaKnown RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 BACH1O14867 736 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 TBX3O15119 743 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 CALUO43852 315 aaPredicted RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 BUB1BO60566 1050 aaPredicted RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 HIP1RO75146 1068 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 TUBBP07437 444 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 MASP1P48740 699 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 MARCKSL1P49006 195 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 FMO5P49326 533 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 GUCY1A3Q02108 690 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 ITIH3Q06033 890 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 RPS6KA1Q15418 735 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 BMT2Q1RMZ1 405 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 CEP55Q53EZ4 464 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 C10orf62Q5T681 223 aaPredicted RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 FOXR2Q6PJQ5 311 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 ZNF720Q7Z2F6 126 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 DAAM2Q86T65 1068 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 LDHDQ86WU2 507 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 ARHGEF19Q8IW93 802 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 FAM178BQ8IXR5 827 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 FAM76AQ8TAV0 307 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 PLEKHO2Q8TD55 490 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 SH3TC2Q8TF17 1288 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 SH3GL2Q99962 352 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 CBWD1Q9BRT8 395 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 TRIM51Q9BSJ1 452 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 POLR3CQ9BUI4 534 aaPredicted RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 PARVGQ9HBI0 331 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 ERVK-5Q9HDB9 667 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 PLCB1Q9NQ66 1216 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 SNTG2Q9NY99 539 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 ZNF70Q9UC06 446 aaPredicted RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 DNAJC12Q9UKB3 198 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 NENFQ9UMX5 172 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 COG5Q9UP83 839 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 TMX2Q9Y320 296 aa6.91□□□□□ -1.3
CHD6-202ENST00000373222 NOC2LQ9Y3T9 749 aaKnown RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 ASTN2O75129 1339 aaPredicted RBP6.91□□□□□ -1.3
CHD6-202ENST00000373222 DCDC2CA8MYV0 355 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 GCOM1H8Y6P7 765 aaPredicted RBP6.9□□□□□ -1.3
CHD6-202ENST00000373222 FOXN3O00409 490 aaPredicted RBP6.9□□□□□ -1.3
CHD6-202ENST00000373222 TTI1O43156 1089 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 FOSP01100 380 aaPredicted RBP6.9□□□□□ -1.3
CHD6-202ENST00000373222 FAM163BP0C2L3 166 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 POLR2MP0CAP2 368 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 MCM3P25205 808 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 CCT5P48643 541 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 IRAK1P51617 712 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 PRELPP51888 382 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 PPP3CAQ08209 521 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 ITGB3BPQ13352 177 aaPredicted RBP6.9□□□□□ -1.3
CHD6-202ENST00000373222 HLTFQ14527 1009 aaKnown RBP eCLIP6.9□□□□□ -1.39e-8■■■■■ 27.1
CHD6-202ENST00000373222 UAP1Q16222 522 aaPredicted RBP6.9□□□□□ -1.3
CHD6-202ENST00000373222 KIAA0907Q7Z7F0 614 aaPredicted RBP6.9□□□□□ -1.3
CHD6-202ENST00000373222 SAMD3Q8N6K7 520 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 SLC35G2Q8TBE7 412 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms