RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 STAT4Q14765 748 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 SNRNP35Q16560 246 aaKnown RBP12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 TBC1D1Q86TI0 1168 aaPredicted RBP12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 MMGT1Q8N4V1 131 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 GRAMD1AQ96CP6 724 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 HEY1Q9Y5J3 304 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 ARHGEF28Q8N1W1 1705 aaKnown RBP12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 ASB14A6NK59 587 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 M0QYV0 167 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 SKIP12755 728 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 RSBN1LQ6PCB5 846 aaPredicted RBP12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 LRIG3Q6UXM1 1119 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 MMS22LQ6ZRQ5 1243 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 CYFIP1Q7L576 1253 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 MCUQ8NE86 351 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 TTC17Q96AE7 1141 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 TRIM10Q9UDY6 481 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 PCSK1NQ9UHG2 260 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 CHUKO15111 745 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 TAF1BQ53T94 588 aaPredicted RBP12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 BEND6Q5SZJ8 279 aaPredicted RBP12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 KLHDC7AQ5VTJ3 777 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 IZUMO3Q5VZ72 239 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 DNAJC7Q99615 494 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 ANKEF1Q9NU02 776 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 KLHL8Q9P2G9 620 aaPredicted RBP12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 BAG5Q9UL15 447 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 ZNF189O75820 626 aaPredicted RBP12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 GCKP35557 465 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 COG7P83436 770 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 MXD4Q14582 209 aaPredicted RBP12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 HSP90AA5PQ58FG0 334 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 ZNF449Q6P9G9 518 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 FAM47EQ6ZV65 393 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 TEX2Q8IWB9 1127 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 RDM1Q8NG50 284 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 SPATA33Q96N06 139 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 S100BP04271 92 aaPredicted RBP12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 CIITAP33076 1130 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 MTMR2Q13614 643 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 RASIP1Q5U651 963 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 CATSPER3Q86XQ3 398 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 C1orf54Q8WWF1 131 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 MAML1Q92585 1016 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 SERPINI1Q99574 410 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 FOXP3Q9BZS1 431 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 PCDHB2Q9Y5E7 798 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 MROH2AA6NES4 1674 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 ZFXP17010 805 aaPredicted RBP12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 CYP11B2P19099 503 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 MUTP22033 750 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 CDK17Q00537 523 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 TTI2Q6NXR4 508 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 RNF149Q8NC42 400 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 SDCCAG3Q96C92 435 aa12.59□□□□□ -0.39
DEPDC1-201ENST00000370966 TCRBV5S4A2TA0A5A2 114 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 UBE2Q2LH0YL09 131 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 PHF2O75151 1096 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 AGTP01019 485 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 KLRC1P26715 233 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 KRT17Q04695 432 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 GRB10Q13322 594 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 FAM102AQ5T9C2 384 aaPredicted RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 KLC3Q6P597 504 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 TRMT10CQ7L0Y3 403 aaKnown RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 FASTKD5Q7L8L6 764 aaKnown RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 TRAPPC11Q7Z392 1133 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 ZNF280CQ8ND82 737 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 SEPT1Q8WYJ6 367 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 TRAIPQ9BWF2 469 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 GCOM2Q9BZD3 368 aaPredicted RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 C17orf75Q9HAS0 396 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 FAM217BQ9NTX9 383 aaPredicted RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 LRFN2Q9ULH4 789 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 MROH1Q8NDA8 1641 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 ITIH2P19823 946 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 PDIA2Q13087 525 aaKnown RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 STILQ15468 1287 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 CDKAL1Q5VV42 579 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 TWF2Q6IBS0 349 aaKnown RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 CDKL3Q8IVW4 592 aaPredicted RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 MS4A14Q96JA4 679 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 RBM12Q9NTZ6 932 aaKnown RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 KLRK1P26718 216 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 NCAPHQ15003 741 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 HEATR6Q6AI08 1181 aaKnown RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 CENPPQ6IPU0 288 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 KIAA1841Q6NSI8 718 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 RCOR2Q8IZ40 523 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 CEP120Q8N960 986 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 NOA1Q8NC60 698 aaKnown RBP12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 C18orf8Q96DM3 657 aa12.58□□□□□ -0.4
DEPDC1-201ENST00000370966 NOP53Q9NZM5 478 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms