RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 ATP5DP30049 168 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 NMT1P30419 496 aaKnown RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 TMED2Q15363 201 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 SIX1Q15475 284 aaPredicted RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 PARP6Q2NL67 630 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 ZC2HC1CQ53FD0 456 aaPredicted RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 RNF207Q6ZRF8 634 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 ARHGEF18Q6ZSZ5 1173 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 CYFIP1Q7L576 1253 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 AGGF1Q8N302 714 aaeCLIP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 RDH13Q8NBN7 331 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 SLC7A6OSQ96CW6 309 aaPredicted RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 C9orf72Q96LT7 481 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 GPR101Q96P66 508 aaPredicted RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 LRRC37BQ96QE4 947 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 ADAM33Q9BZ11 813 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 JMJD4Q9H9V9 463 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 METTL5Q9NRN9 209 aaKnown RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 MAST2Q6P0Q8 1798 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 MIF4GDA9UHW6 222 aaKnown RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 TGFB1I1O43294 461 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 SPOPO43791 374 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 TOM1O60784 492 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 NPTXRO95502 500 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 TTC4O95801 387 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 CYP2J2P51589 502 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 RPS8P62241 208 aaKnown RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 STRN3Q13033 797 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 MKRN3Q13064 507 aaKnown RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 TSNAXIP1Q2TAA8 658 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 RFWD3Q6PCD5 774 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 NSMFQ6X4W1 530 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 KIAA0825Q8IV33 1275 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 RHOT2Q8IXI1 618 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 ANKRD27Q96NW4 1050 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 AGPAT1Q99943 283 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 INTS2Q9H0H0 1204 aaKnown RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 NINJ2Q9NZG7 142 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 MTUS1Q9ULD2 1270 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 PHTF1Q9UMS5 762 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 LAMB2P55268 1798 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 DDX60LQ5H9U9 1706 aaKnown RBP10.34□□□□□ -0.75
LRRC40-201ENST00000370952 GPR75-ASB3A0A0A6YYF3 556 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 RTN3O95197 1032 aaPredicted RBP10.33□□□□□ -0.76
LRRC40-201ENST00000370952 BAG3O95817 575 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 ITGA8P53708 1063 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 CCDC15Q0P6D6 951 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 TRAF1Q13077 416 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 SF3B3Q15393 1217 aaKnown RBP10.33□□□□□ -0.76
LRRC40-201ENST00000370952 C16orf86Q6ZW13 317 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.33□□□□□ -0.76
LRRC40-201ENST00000370952 ADGRF4Q8IZF3 695 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 GALNT15Q8N3T1 639 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 BHMT2Q9H2M3 363 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 ACP6Q9NPH0 428 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 NMRK1Q9NWW6 199 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 ASB3Q9Y575 518 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 A0A1W2PRG0 241 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 RASA4BC9J798 803 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 SLC16A3O15427 465 aaKnown RBP10.33□□□□□ -0.76
LRRC40-201ENST00000370952 RASA4O43374 803 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 ALDH3A1P30838 453 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 CLK2P49760 499 aaKnown RBP10.33□□□□□ -0.76
LRRC40-201ENST00000370952 ITPK1Q13572 414 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 ACVR2BQ13705 512 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 RCN2Q14257 317 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 KHDC1Q4VXA5 237 aaKnown RBP10.33□□□□□ -0.76
LRRC40-201ENST00000370952 TMEM63BQ5T3F8 832 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 PHLDB3Q6NSJ2 640 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 SLC30A10Q6XR72 485 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 APBB1IPQ7Z5R6 666 aaPredicted RBP10.33□□□□□ -0.76
LRRC40-201ENST00000370952 CADPS2Q86UW7 1296 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 BORCS6Q96GS4 357 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 FAM118BQ9BPY3 351 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 TRIM4Q9C037 500 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 PSTPIP2Q9H939 334 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 CHST7Q9NS84 486 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 APEX2Q9UBZ4 518 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 DNM3Q9UQ16 869 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 DOT1LQ8TEK3 1739 aa10.33□□□□□ -0.76
LRRC40-201ENST00000370952 GTPBP10A4D1E9 387 aaKnown RBP10.32□□□□□ -0.76
LRRC40-201ENST00000370952 USP17L10C9JJH3 530 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 SMAPO00193 183 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 MAPK13O15264 365 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 TBCAO75347 108 aaKnown RBP10.32□□□□□ -0.76
LRRC40-201ENST00000370952 ACADSP16219 412 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 SMARCA1P28370 1054 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 PSMC2P35998 433 aaKnown RBP10.32□□□□□ -0.76
LRRC40-201ENST00000370952 BTDP43251 543 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 IL9RQ01113 521 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 LBRQ14739 615 aaKnown RBP10.32□□□□□ -0.76
LRRC40-201ENST00000370952 CLUL1Q15846 466 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 CCDC6Q16204 474 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 SGO2Q562F6 1265 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 FOXB2Q5VYV0 432 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 CYP4F22Q6NT55 531 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 RPUSD2Q8IZ73 545 aaKnown RBP10.32□□□□□ -0.76
LRRC40-201ENST00000370952 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
LRRC40-201ENST00000370952 MRRFQ96E11 262 aaKnown RBP10.32□□□□□ -0.76
LRRC40-201ENST00000370952 ZNF287Q9HBT7 754 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms