RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PLCG1P19174 1290 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 RTP1P59025 263 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 NHLH1Q02575 133 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 HYAL2Q12891 473 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 MOGSQ13724 837 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 NLRP8Q86W28 1048 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 ASAP3Q8TDY4 903 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 NXPE3Q969Y0 559 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 LENG9Q96B70 501 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 MMTAG2Q9BU76 263 aaKnown RBP9.7□□□□□ -0.86
TPM3-213ENST00000368545 TEX13BQ9BXU2 312 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 GTPBP4Q9BZE4 634 aaKnown RBP9.7□□□□□ -0.86
TPM3-213ENST00000368545 FAM86B1E9PN63 330 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 FAM86B2P0C5J1 330 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 BMP6P22004 513 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 HOXA7P31268 230 aaPredicted RBP9.7□□□□□ -0.86
TPM3-213ENST00000368545 SOX18P35713 384 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 CEP55Q53EZ4 464 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 HYIQ5T013 277 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 NIPA1Q7RTP0 329 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 DHX40Q8IX18 779 aaKnown RBP9.7□□□□□ -0.86
TPM3-213ENST00000368545 AOPEPQ8N6M6 819 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 USP38Q8NB14 1042 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 ERMNQ8TAM6 284 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 TBC1D5Q92609 795 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 SGSM3Q96HU1 749 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 NSUN5Q96P11 429 aaKnown RBP9.7□□□□□ -0.86
TPM3-213ENST00000368545 TRERF1Q96PN7 1200 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 LRRC27Q9C0I9 530 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 RNF146Q9NTX7 359 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 TMEM39AQ9NV64 488 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 HCSTQ9UBK5 93 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 MORF4L1Q9UBU8 362 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 MSRAQ9UJ68 235 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 ZNF214Q9UL59 606 aaPredicted RBP9.7□□□□□ -0.86
TPM3-213ENST00000368545 IGLV3-22A0A075B6J6 115 aa9.69□□□□□ -0.86
TPM3-213ENST00000368545 UPP2O95045 317 aa9.69□□□□□ -0.86
TPM3-213ENST00000368545 PSAPP07602 524 aa9.69□□□□□ -0.86
TPM3-213ENST00000368545 BMP2P12643 396 aa9.69□□□□□ -0.86
TPM3-213ENST00000368545 NFKB1P19838 968 aa9.69□□□□□ -0.86
TPM3-213ENST00000368545 ITGB8P26012 769 aa9.69□□□□□ -0.86
TPM3-213ENST00000368545 TMEM119Q4V9L6 283 aa9.69□□□□□ -0.86
TPM3-213ENST00000368545 MUM1L1Q5H9M0 696 aa9.69□□□□□ -0.86
TPM3-213ENST00000368545 SNRNP48Q6IEG0 339 aaKnown RBP9.69□□□□□ -0.86
TPM3-213ENST00000368545 MRM1Q6IN84 353 aaKnown RBP9.69□□□□□ -0.86
TPM3-213ENST00000368545 RNF207Q6ZRF8 634 aa9.69□□□□□ -0.86
TPM3-213ENST00000368545 TRIM44Q96DX7 344 aaPredicted RBP9.69□□□□□ -0.86
TPM3-213ENST00000368545 AGTPBP1Q9UPW5 1226 aa9.69□□□□□ -0.86
TPM3-213ENST00000368545 A0A087WWV3 80 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 KHNYNO15037 678 aaKnown RBP9.68□□□□□ -0.86
TPM3-213ENST00000368545 MSH4O15457 936 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 IMPDH2P12268 514 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 MAPK4P31152 587 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 RGS2P41220 211 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 MYL5Q02045 173 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 KCNB1Q14721 858 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 RPS26P11Q5JNZ5 115 aaPredicted RBP9.68□□□□□ -0.86
TPM3-213ENST00000368545 C6orf118Q5T5N4 469 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 MFSD14CQ5VZR4 134 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 XRRA1Q6P2D8 792 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 SARM1Q6SZW1 724 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 LBX2Q6XYB7 198 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 GADL1Q6ZQY3 521 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 PLA2G4DQ86XP0 818 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 RAVER1Q8IY67 606 aaKnown RBP9.68□□□□□ -0.86
TPM3-213ENST00000368545 LARP4BQ92615 738 aaKnown RBP9.68□□□□□ -0.86
TPM3-213ENST00000368545 CCDC47Q96A33 483 aaKnown RBP9.68□□□□□ -0.86
TPM3-213ENST00000368545 ACAD9Q9H845 621 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 ATP8A1Q9Y2Q0 1164 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 PCDHB14Q9Y5E9 798 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 EFSO43281 561 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 ADCY5O95622 1261 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 RPN1P04843 607 aaKnown RBP9.68□□□□□ -0.86
TPM3-213ENST00000368545 TBX4P57082 545 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 RPS6P62753 249 aaKnown RBP9.68□□□□□ -0.86
TPM3-213ENST00000368545 IRX3P78415 501 aaPredicted RBP9.68□□□□□ -0.86
TPM3-213ENST00000368545 SPIRE1Q08AE8 756 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 GRB10Q13322 594 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 CUL4BQ13620 913 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 TMEM132BQ14DG7 1078 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 ISM2Q6H9L7 571 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 POTEGQ6S5H5 508 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 CYP4X1Q8N118 509 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 SYTL5Q8TDW5 730 aaPredicted RBP9.68□□□□□ -0.86
TPM3-213ENST00000368545 C7orf25Q9BPX7 421 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 MXRA8Q9BRK3 442 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 GJD2Q9UKL4 321 aa9.68□□□□□ -0.86
TPM3-213ENST00000368545 MEIS1O00470 390 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 CCT6AP40227 531 aaKnown RBP9.67□□□□□ -0.86
TPM3-213ENST00000368545 STAT3P40763 770 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 PPP2R5CQ13362 524 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 HS1BP3Q53T59 392 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 TREML2Q5T2D2 321 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 LRCH2Q5VUJ6 765 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 CNNM4Q6P4Q7 775 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 SLC30A10Q6XR72 485 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.67□□□□□ -0.86
TPM3-213ENST00000368545 TMEM102Q8N9M5 508 aaPredicted RBP9.67□□□□□ -0.86
TPM3-213ENST00000368545 CHST13Q8NET6 341 aa9.67□□□□□ -0.86
TPM3-213ENST00000368545 WDR11Q9BZH6 1224 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms