RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 JRKLQ9Y4A0 524 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 TBKBP1A7MCY6 615 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 GPC4O75487 556 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 CLCN3P51790 818 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 TDRD10Q5VZ19 366 aaKnown RBP11.45□□□□□ -0.58
PTPRK-205ENST00000368213 ZC3H15Q8WU90 426 aaKnown RBP11.45□□□□□ -0.58
PTPRK-205ENST00000368213 FAF2Q96CS3 445 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 RBM41Q96IZ5 413 aaKnown RBP11.45□□□□□ -0.58
PTPRK-205ENST00000368213 KLC2Q9H0B6 622 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 MUC3BQ9H195 1237 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 PIK3R2O00459 728 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 EVI5O60447 810 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 VTNP04004 478 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 TROVE2P10155 538 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTPRK-205ENST00000368213 DNAJB2P25686 324 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 TAF6P49848 677 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 NPEPPSP55786 919 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 SLC12A1Q13621 1099 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 TRIP13Q15645 432 aaPredicted RBP11.44□□□□□ -0.58
PTPRK-205ENST00000368213 CEP85LQ5SZL2 805 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 CDC26Q8NHZ8 85 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 GPT2Q8TD30 523 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 SH3KBP1Q96B97 665 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 REEP2Q9BRK0 252 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 PXMP2Q9NR77 195 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 SPTLC3Q9NUV7 552 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 MAD2L2Q9UI95 211 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 IGSF9BQ9UPX0 1349 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 PGRMC1O00264 195 aaKnown RBP11.44□□□□□ -0.58
PTPRK-205ENST00000368213 PNPLA4P41247 253 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 ATP11AP98196 1134 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 NCOA4Q13772 614 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 SGSM1Q2NKQ1 1148 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 FRA10AC1Q70Z53 315 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 VPS39Q96JC1 886 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 EPAS1Q99814 870 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 MAGEB5Q9BZ81 275 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 HACD3Q9P035 362 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 AK9Q5TCS8 1911 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 PXDNQ92626 1479 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 B3GAT3O94766 335 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 CLTAP09496 248 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 ARL4DP49703 201 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 ASPHQ12797 758 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 JADE1Q6IE81 842 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 TRIM72Q6ZMU5 477 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 RMDN1Q96DB5 314 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 UNC45AQ9H3U1 944 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 VTA1Q9NP79 307 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 UBQLN1Q9UMX0 589 aaKnown RBP11.44□□□□□ -0.58
PTPRK-205ENST00000368213 KLRC1P26715 233 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 PAPOLAP51003 745 aaKnown RBP11.44□□□□□ -0.58
PTPRK-205ENST00000368213 HSD17B4P51659 736 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 EXOSC10Q01780 885 aaKnown RBP11.44□□□□□ -0.58
PTPRK-205ENST00000368213 PTF1AQ7RTS3 328 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 CCDC170Q8IYT3 715 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 GUF1Q8N442 669 aaKnown RBP11.44□□□□□ -0.58
PTPRK-205ENST00000368213 DEPDC1BQ8WUY9 529 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 PBXIP1Q96AQ6 731 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 GDAP1L1Q96MZ0 367 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 DAAM1Q9Y4D1 1078 aa11.44□□□□□ -0.58
PTPRK-205ENST00000368213 H3BRB1 525 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 ACVR2BQ13705 512 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 DRAP1Q14919 205 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-205ENST00000368213 PTGISQ16647 500 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 FSCN1Q16658 493 aaKnown RBP11.43□□□□□ -0.58
PTPRK-205ENST00000368213 PCGF5Q86SE9 256 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 C17orf53Q8N3J3 647 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-205ENST00000368213 IGFLR1Q9H665 355 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 TUT1Q9H6E5 874 aaKnown RBP11.43□□□□□ -0.58
PTPRK-205ENST00000368213 PCDHA13Q9Y5I0 950 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 VWA5AO00534 786 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 EBAG9O00559 213 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 HSPA6P17066 643 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 ATICP31939 592 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 HARS2P49590 506 aaKnown RBP11.43□□□□□ -0.58
PTPRK-205ENST00000368213 GPC5P78333 572 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 FKBP1CQ5VVH2 108 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 SPOPLQ6IQ16 392 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 VSIG1Q86XK7 387 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 AFAP1L1Q8TED9 768 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 MRPS31Q92665 395 aaKnown RBP11.43□□□□□ -0.58
PTPRK-205ENST00000368213 SETD4Q9NVD3 440 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 ARHGAP23Q9P227 1491 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 KIF1AQ12756 1690 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 NFIBO00712 420 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 PDXKO00764 312 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 RGS7P49802 495 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 AP1B1Q10567 949 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 GLRA4Q5JXX5 417 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 C10orf120Q5SQS8 335 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 CYP4F22Q6NT55 531 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 CDR2LQ86X02 465 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-205ENST00000368213 TMEM199Q8N511 208 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 TRPM4Q8TD43 1214 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 MED15Q96RN5 788 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 FAN1Q9Y2M0 1017 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 SALL1Q9NSC2 1324 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 SLC26A4O43511 780 aa11.43□□□□□ -0.58
PTPRK-205ENST00000368213 CYP2C19P33261 490 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms