RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 KLHL4Q9C0H6 718 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ABCA8O94911 1581 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PLK4O00444 970 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PARP1P09874 1014 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 UAP1Q16222 522 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 NUDCD3Q8IVD9 361 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CHCHD6Q9BRQ6 235 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 BCL2L12Q9HB09 334 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ATPIF1Q9UII2 106 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PHF2O75151 1096 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 GPTP24298 496 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CSTF2P33240 577 aaKnown RBP eCLIP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 BTN2A1Q7KYR7 527 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SV2BQ7L1I2 683 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TRIM47Q96LD4 638 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 MYL10Q9BUA6 226 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 RYDENQ9NUL5 291 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CLUHO75153 1309 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 RPS6KB1P23443 525 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PAPOLAP51003 745 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 RAB14P61106 215 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 FMO2Q99518 471 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CAB39LQ9H9S4 337 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PXDNLA1KZ92 1463 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 FAM92AA1XBS5 289 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CRTAPO75718 401 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CCNE2O96020 404 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TBXAS1P24557 533 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 EIF5AP63241 154 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TSHZ1Q6ZSZ6 1077 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TMEM190Q8WZ59 177 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 QPCTLQ9NXS2 382 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SLC24A2Q9UI40 661 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SIX4Q9UIU6 781 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SNX9Q9Y5X1 595 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TRPC5OSA6NMA1 111 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 WLSQ5T9L3 541 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 KLHL29Q96CT2 875 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 DAB1O75553 588 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 LYPLA2O95372 231 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 MTIF2P46199 727 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TCP11X2Q5H9J9 407 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 NT5DC1Q5TFE4 455 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 VSTM4Q8IW00 320 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 PLAAQ9Y263 795 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ISPDA4D126 451 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 FMNL1O95466 1100 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 VAV1P15498 845 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 PSEN1P49768 467 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 GUCY2FP51841 1108 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 MROH9Q5TGP6 573 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 RNF207Q6ZRF8 634 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 STK32CQ86UX6 486 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TBCBQ99426 244 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 GRK3P35626 688 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ANKRD26P1Q6NSI1 321 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 HAO1Q9UJM8 370 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CENPBD1B2RD01 187 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ATF7P17544 494 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 DHX33Q9H6R0 707 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 MRC2Q9UBG0 1479 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CD2BP2O95400 341 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 KRT19P08727 400 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 PTX3P26022 381 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 SOX6P35712 828 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CMTR1Q8N1G2 835 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 RHBDF1Q96CC6 855 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 PUS3Q9BZE2 481 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 RETREG1Q9H6L5 497 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ADAM30Q9UKF2 790 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 hCG_2014768A0A024R1R8 64 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 STOX1Q6ZVD7 989 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 LRRC34Q8IZ02 419 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 MGARPQ8TDB4 240 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 MLH3Q9UHC1 1453 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CNNM1Q9NRU3 951 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ATP8A2Q9NTI2 1148 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 PCDHGA10Q9Y5H3 936 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 FBXO43Q4G163 708 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 SLC24A3Q9HC58 644 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 BCAP31P51572 246 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ALLCQ8N6M5 410 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 KLHL1Q9NR64 748 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 PLAGL2Q9UPG8 496 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 STX11O75558 287 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF572Q7Z3I7 529 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 SEPT1Q8WYJ6 367 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 RDH12Q96NR8 316 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 GINS4Q9BRT9 223 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 VCPKMTQ9H867 229 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 KLHL3Q9UH77 587 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 ERI2A8K979 691 aaKnown RBP3.97□□□□□ -1.77
SYNE1-207ENST00000367255 HHATQ5VTY9 493 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CYP2U1Q7Z449 544 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 NR4A3Q92570 626 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CYP26B1Q9NR63 512 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 CTPS1P17812 591 aa3.97□□□□□ -1.77
SYNE1-207ENST00000367255 UBE3CQ15386 1083 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms