RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 ARFIP2P53365 341 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 KLC1Q07866 573 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 CRYMQ14894 314 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 KYAT1Q16773 422 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 CELF1Q92879 486 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 KPNA7A9QM74 516 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 GZMAP12544 262 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 PEX3P56589 373 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 MEA1Q16626 185 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 C1orf146Q5VVC0 180 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 ANKRD65E5RJM6 399 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 ZFXP17010 805 aaPredicted RBP12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 TMEM270Q6UE05 265 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 LRRC31Q6UY01 552 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 FAM196AQ6ZSG2 479 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 PJA2O43164 708 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 STMN1P16949 149 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 EPHA7Q15375 998 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 GH2P01242 217 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 DNAL1Q4LDG9 190 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 KRT80Q6KB66 452 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 ANO5Q75V66 913 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 AENQ8WTP8 325 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 SLC38A10Q9HBR0 1119 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 SEPT10Q9P0V9 454 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 MYH7BA7E2Y1 1941 aa12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 CFAP69A5D8W1 941 aa12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 CREB3O43889 395 aa12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 SPDL1Q96EA4 605 aa12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 WDR35Q9P2L0 1181 aa12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 NALCNQ8IZF0 1738 aa12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 LMO7Q8WWI1 1683 aa12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 ARL13BQ3SXY8 428 aa12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 RC3H1Q5TC82 1133 aaKnown RBP12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 RBM15Q96T37 977 aaKnown RBP eCLIP12.52□□□□□ -0.41e-6■■□□□ 14.2
CDC42BPA-202ENST00000366764 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 JCADQ9P266 1359 aa12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 DOK7Q18PE1 504 aa12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 PRMT1Q99873 361 aaKnown RBP12.52□□□□□ -0.4
CDC42BPA-202ENST00000366764 VPS39Q96JC1 886 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 BAG5Q9UL15 447 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 DYNLT1P63172 113 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 TAF12Q16514 161 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 RARS2Q5T160 578 aaKnown RBP12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 PDHBP11177 359 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 TNFAIP2Q03169 654 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 ACTN3Q08043 901 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 ZNF699Q32M78 642 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 RMDN3Q96TC7 470 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 RAD23BP54727 409 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 XRRA1Q6P2D8 792 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 FOXR2Q6PJQ5 311 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 FRMD8P1Q9BZ68 369 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 RPF1Q9H9Y2 349 aaKnown RBP12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 TMEM260Q9NX78 707 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 GTF3C4Q9UKN8 822 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 IFRD2Q12894 506 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 GRAMD1BQ3KR37 738 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 C11orf63Q6NUN7 778 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 ACAD11Q709F0 780 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 REEP2Q9BRK0 252 aa12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 MTO1Q9Y2Z2 717 aaKnown RBP12.52□□□□□ -0.41
CDC42BPA-202ENST00000366764 TCP10L2B9ZVM9 353 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 INO80B-WBP1J3KQ70 363 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 LPXNO60711 386 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 DNAAF3Q8N9W5 541 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 INO80BQ9C086 356 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 SLC9A2Q9UBY0 812 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 GNA15P30679 374 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 HNRNPH1P31943 449 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 GRIN1Q05586 938 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 SEC23AQ15436 765 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 PRDM4Q9UKN5 801 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 TTLL3Q9Y4R7 772 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 CLDN3O15551 220 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 FAF2Q96CS3 445 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 SNX25Q9H3E2 840 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 AIPL1Q9NZN9 384 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 FBXO40Q9UH90 709 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 ATP8B3O60423 1300 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 DENND3A2RUS2 1198 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 H3BQF6 201 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 HAUS6Q7Z4H7 955 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 GINM1Q9NU53 330 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 ZNF335Q9H4Z2 1342 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 PXDNQ92626 1479 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 ARHGAP23Q9P227 1491 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 PSTPIP1O43586 416 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 TRIM49P0CI25 452 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 TRIM49CP0CI26 452 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 FGFR4P22455 802 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 KLRC1P26715 233 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 EFNA5P52803 228 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 GPD1LQ8N335 351 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms