RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 SUGT1Q9Y2Z0 365 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 RAPGEF6Q8TEU7 1601 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 NBNO60934 754 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 KCNA2P16389 499 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 CPA2P48052 419 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 PLEKHM3Q6ZWE6 761 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 HDDC2Q7Z4H3 204 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 METTL23Q86XA0 190 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 SLC9A2Q9UBY0 812 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 STRNO43815 780 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 LZTS3O60299 673 aaPredicted RBP14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 HSPA1AP0DMV8 641 aaKnown RBP14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 HSPA1BP0DMV9 641 aaKnown RBP14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 MYBL1P10243 752 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 HSPA13P48723 471 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 PLOD1Q02809 727 aaPredicted RBP14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 SF3B3Q15393 1217 aaKnown RBP14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 RAD9BQ6WBX8 426 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 ARMCX2Q7L311 632 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 MICU2Q8IYU8 434 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 XXYLT1Q8NBI6 393 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 C3orf20Q8ND61 904 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 C9orf72Q96LT7 481 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 KIF2CQ99661 725 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 FUT8Q9BYC5 575 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 BFARQ9NZS9 450 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 DTNAQ9Y4J8 743 aa14.17□□□□□ -0.14
CCDC144A-203ENST00000360495 PSMD14O00487 310 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 SKAP2O75563 359 aaPredicted RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 TMCC1O94876 653 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 TCN1P20061 433 aaPredicted RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 RAB14P61106 215 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 TTC33Q6PID6 262 aaPredicted RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 PRPF39Q86UA1 669 aaKnown RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 MDM1Q8TC05 714 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 ATXN7L3BQ96GX2 97 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 ATP10DQ9P241 1426 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 UBE4BO95155 1302 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 ITIH2P19823 946 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 OSBPP22059 807 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 KNOP1Q1ED39 458 aaKnown RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 METTL16Q86W50 562 aaKnown RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 LRRC34Q8IZ02 419 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 B4GALNT2Q8NHY0 566 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 ROPN1BQ9BZX4 212 aaPredicted RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 ROPN1Q9HAT0 212 aaPredicted RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 SYBUQ9NX95 663 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 CYP2D7A0A087X1C5 515 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 SLFN12LQ6IEE8 588 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 PODNQ7Z5L7 613 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 GPR141Q7Z602 305 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 PIGOQ8TEQ8 1089 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 SPATA17Q96L03 361 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 TCP10L2B9ZVM9 353 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 BCAR1P56945 870 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 ZNF667Q5HYK9 610 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 WLSQ5T9L3 541 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 CDKL3Q8IVW4 592 aaPredicted RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 TC2NQ8N9U0 490 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 ZNF507Q8TCN5 953 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 EXOSC4Q9NPD3 245 aaKnown RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 AP4S1Q9Y587 144 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 ITIH6Q6UXX5 1313 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 SRP72O76094 671 aaKnown RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 GNL1P36915 607 aaPredicted RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 P3H1Q32P28 736 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 GUF1Q8N442 669 aaKnown RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 ZFYVE19Q96K21 471 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 COQ7Q99807 217 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 RPF1Q9H9Y2 349 aaKnown RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 ATP10BO94823 1461 aa14.16□□□□□ -0.14
CCDC144A-203ENST00000360495 FXR1P51114 621 aaKnown RBP eCLIP14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 ABCE1P61221 599 aaKnown RBP14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 MMGT1Q8N4V1 131 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 BTG4Q9NY30 223 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 SASH1O94885 1247 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 SRGAP2CP0DJJ0 459 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 RNF139Q8WU17 664 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 ISCUQ9H1K1 167 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 ATP6V0A4Q9HBG4 840 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 SYNDIG1LA6NDD5 238 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 CYP2E1P05181 493 aaPredicted RBP14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 PDHBP11177 359 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 ITIH4Q14624 930 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 SLC18A3Q16572 532 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 LUZP2Q86TE4 346 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 TLK2Q86UE8 772 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 KIAA0825Q8IV33 1275 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 NMD3Q96D46 503 aaKnown RBP14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 OSBPL8Q9BZF1 889 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 PAX7P23759 505 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 LVRNQ6Q4G3 990 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 HEATR4Q86WZ0 1026 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 PNKPQ96T60 521 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 TMEM245Q9H330 911 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 SEL1LQ9UBV2 794 aa14.15□□□□□ -0.14
CCDC144A-203ENST00000360495 PNMA6FA0A0J9YX94 578 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 K7ERI5 159 aa14.14□□□□□ -0.15
CCDC144A-203ENST00000360495 GYS1P13807 737 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms