RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 AOPEPQ8N6M6 819 aa27.73■■■□□ 2.03
SSBP3-202ENST00000357475 TSG101Q99816 390 aa27.73■■■□□ 2.03
SSBP3-202ENST00000357475 BICDL2A1A5D9 508 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 GARTP22102 1010 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 NR2F2P24468 414 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 TNFSF9P41273 254 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 NCAPHQ15003 741 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 EDRF1Q3B7T1 1238 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 C12orf56Q8IXR9 622 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 THNSL1Q8IYQ7 743 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 GOLGA5Q8TBA6 731 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 NOC3LQ8WTT2 800 aaKnown RBP27.72■■■□□ 2.03
SSBP3-202ENST00000357475 CHST12Q9NRB3 414 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 AGO2Q9UKV8 859 aaKnown RBP27.72■■■□□ 2.03
SSBP3-202ENST00000357475 ZSCAN20P17040 1043 aaPredicted RBP27.72■■■□□ 2.03
SSBP3-202ENST00000357475 IBSPP21815 317 aaPredicted RBP27.72■■■□□ 2.03
SSBP3-202ENST00000357475 ACOT2P49753 483 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 OSTNP61366 133 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 SNRPFP62306 86 aaKnown RBP27.72■■■□□ 2.03
SSBP3-202ENST00000357475 IQCB1Q15051 598 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 CT47A1Q5JQC4 288 aaPredicted RBP27.72■■■□□ 2.03
SSBP3-202ENST00000357475 SLFN12LQ6IEE8 588 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 ZC3H3Q8IXZ2 948 aaKnown RBP27.72■■■□□ 2.03
SSBP3-202ENST00000357475 CSGALNACT2Q8N6G5 542 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 BPIFA3Q9BQP9 254 aa27.72■■■□□ 2.03
SSBP3-202ENST00000357475 NXF3Q9H4D5 531 aaKnown RBP27.72■■■□□ 2.03
SSBP3-202ENST00000357475 MCF2P10911 925 aa27.71■■■□□ 2.03
SSBP3-202ENST00000357475 ADAM9Q13443 819 aa27.71■■■□□ 2.03
SSBP3-202ENST00000357475 NFIL3Q16649 462 aa27.71■■■□□ 2.03
SSBP3-202ENST00000357475 HSP90AA4PQ58FG1 418 aa27.71■■■□□ 2.03
SSBP3-202ENST00000357475 CRELD2Q6UXH1 353 aaPredicted RBP27.71■■■□□ 2.03
SSBP3-202ENST00000357475 LUZP1Q86V48 1076 aa27.71■■■□□ 2.03
SSBP3-202ENST00000357475 SMG8Q8ND04 991 aaKnown RBP27.71■■■□□ 2.03
SSBP3-202ENST00000357475 ENOX1Q8TC92 643 aaKnown RBP27.71■■■□□ 2.03
SSBP3-202ENST00000357475 FAM213AQ9BRX8 229 aa27.71■■■□□ 2.03
SSBP3-202ENST00000357475 NAT10Q9H0A0 1025 aaKnown RBP27.71■■■□□ 2.03
SSBP3-202ENST00000357475 IL23AQ9NPF7 189 aa27.71■■■□□ 2.03
SSBP3-202ENST00000357475 RGS18Q9NS28 235 aa27.71■■■□□ 2.03
SSBP3-202ENST00000357475 FAM105AQ9NUU6 356 aa27.71■■■□□ 2.03
SSBP3-202ENST00000357475 CGNQ9P2M7 1197 aaKnown RBP27.71■■■□□ 2.03
SSBP3-202ENST00000357475 ANK1P16157 1881 aa27.7■■■□□ 2.03
SSBP3-202ENST00000357475 MEIS3P2A8K0S8 358 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 MEFVO15553 781 aaPredicted RBP27.7■■■□□ 2.02
SSBP3-202ENST00000357475 FPGSQ05932 587 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 SPATA1Q5VX52 437 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 CNKSR3Q6P9H4 555 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 CBWD2Q8IUF1 395 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 SLC9A9Q8IVB4 645 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 RDH13Q8NBN7 331 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 CCDC51Q96ER9 411 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 ADPGKQ9BRR6 497 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 SRRTQ9BXP5 876 aaKnown RBP27.7■■■□□ 2.02
SSBP3-202ENST00000357475 TSPYL2Q9H2G4 693 aaPredicted RBP27.7■■■□□ 2.02
SSBP3-202ENST00000357475 RNF39Q9H2S5 420 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 SAMSN1Q9NSI8 373 aaKnown RBP27.7■■■□□ 2.02
SSBP3-202ENST00000357475 NFE2L3Q9Y4A8 694 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 IPPQ9Y573 584 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 PCDHB2Q9Y5E7 798 aa27.7■■■□□ 2.02
SSBP3-202ENST00000357475 TRIP11Q15643 1979 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.69■■■□□ 2.02
SSBP3-202ENST00000357475 ENPP3O14638 875 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 AKAP3O75969 853 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 ADRB2P07550 413 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 FKBP3Q00688 224 aaKnown RBP27.69■■■□□ 2.02
SSBP3-202ENST00000357475 MYL5Q02045 173 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 DCAF4L1Q3SXM0 396 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 CEP135Q66GS9 1140 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 FOXR2Q6PJQ5 311 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 XXYLT1Q8NBI6 393 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 RNF214Q8ND24 703 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 APBB2Q92870 758 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 CXCL16Q9H2A7 254 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 HSD3B7Q9H2F3 369 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 PTPRSQ13332 1948 aa27.69■■■□□ 2.02
SSBP3-202ENST00000357475 C9IYK1 514 aa27.68■■■□□ 2.02
SSBP3-202ENST00000357475 OGTO15294 1046 aa27.68■■■□□ 2.02
SSBP3-202ENST00000357475 ATF7P17544 494 aaPredicted RBP27.68■■■□□ 2.02
SSBP3-202ENST00000357475 WNT7BP56706 349 aa27.68■■■□□ 2.02
SSBP3-202ENST00000357475 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.68■■■□□ 2.02
SSBP3-202ENST00000357475 IRF2BP1Q8IU81 584 aa27.68■■■□□ 2.02
SSBP3-202ENST00000357475 TMEM174Q8WUU8 243 aa27.68■■■□□ 2.02
SSBP3-202ENST00000357475 APOL6Q9BWW8 343 aa27.68■■■□□ 2.02
SSBP3-202ENST00000357475 FTHL17Q9BXU8 183 aa27.68■■■□□ 2.02
SSBP3-202ENST00000357475 TRIM6Q9C030 488 aaPredicted RBP27.68■■■□□ 2.02
SSBP3-202ENST00000357475 FANCLQ9NW38 375 aa27.68■■■□□ 2.02
SSBP3-202ENST00000357475 SNTG2Q9NY99 539 aa27.68■■■□□ 2.02
SSBP3-202ENST00000357475 CITO14578 2027 aa27.68■■■□□ 2.02
SSBP3-202ENST00000357475 EXOC3O60645 756 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 PPIGQ13427 754 aaKnown RBP eCLIP27.67■■■□□ 2.024e-9■■□□□ 14.2
SSBP3-202ENST00000357475 GPD1LQ8N335 351 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 FAM200AQ8TCP9 573 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 LPPQ93052 612 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 FBXL18Q96ME1 805 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 TRAIPQ9BWF2 469 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 A0A0U1RQF3 1178 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 CETN3O15182 167 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 EXTL3O43909 919 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 STAG3L1P0CL83 205 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 AKAP5P24588 427 aa27.67■■■□□ 2.02
SSBP3-202ENST00000357475 RPUSD2Q8IZ73 545 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms